Structural and Biochemical Determinants of Ligand Binding by the c-di-GMP Riboswitch, (Q27663893)

2

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Alison L Livingston

3

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Carly A Shanahan

4

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Scott A Strobel

The c-di-GMP binding protein YcgR controls flagellar motor direction and speed to affect chemotaxis by a "backstop brake" mechanism

5

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language of work or name

English

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publication date

31 August 2010

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published in

Biochemistry

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volume

49

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issue

34

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page(s)

7351-9

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cites work

1 reference

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Vibrio cholerae VpsT Regulates Matrix Production and Motility by Directly Sensing Cyclic di-GMP

20 March 2017

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The cAMP receptor-like protein CLP is a novel c-di-GMP receptor linking cell-cell signaling to virulence gene expression in Xanthomonas campestris

20 March 2017

1 reference

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Recognition of the bacterial second messenger cyclic diguanylate by its cognate riboswitch

20 March 2017

1 reference

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Structural basis of ligand binding by a c-di-GMP riboswitch

20 March 2017

1 reference

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Identification of 22 candidate structured RNAs in bacteria using the CMfinder comparative genomics pipeline

20 March 2017

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Roles of cyclic diguanylate in the regulation of bacterial pathogenesis

20 March 2017

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Cell cycle-dependent dynamic localization of a bacterial response regulator with a novel di-guanylate cyclase output domain

20 March 2017

1 reference

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Likelihood-enhanced fast translation functions

20 March 2017

1 reference

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Coot: model-building tools for molecular graphics

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3146058

Use of TLS parameters to model anisotropic displacements in macromolecular refinement

20 March 2017

2 references

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20 March 2017

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Identification of FleQ from Pseudomonas aeruginosa as a c-di-GMP-responsive transcription factor

29 September 2017

1 reference

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Ribozymes, riboswitches and beyond: regulation of gene expression without proteins

20 March 2017

1 reference

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Principles of c-di-GMP signalling in bacteria

20 March 2017

1 reference

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Riboswitches in eubacteria sense the second messenger cyclic di-GMP

7 April 2017

1 reference

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The cyclic nucleotide monophosphate domain of Xanthomonas campestris global regulator Clp defines a new class of cyclic di-GMP effectors

7 April 2017

1 reference

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Structural and mechanistic determinants of c-di-GMP signalling

29 September 2017

1 reference

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The structural and functional diversity of metabolite-binding riboswitches

29 September 2017

1 reference

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LapD is a bis-(3',5')-cyclic dimeric GMP-binding protein that regulates surface attachment by Pseudomonas fluorescens Pf0-1.

29 September 2017

1 reference

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Second messenger-mediated spatiotemporal control of protein degradation regulates bacterial cell cycle progression

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3146058

A cyclic-di-GMP receptor required for bacterial exopolysaccharide production

29 September 2017

1 reference

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c-di-GMP-mediated regulation of virulence and biofilm formation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3146058

Mechanisms of cyclic-di-GMP signaling in bacteria

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3146058

Cyclic di-GMP as a second messenger

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3146058

PilZ domain is part of the bacterial c-di-GMP binding protein

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3146058

Cyclic di-GMP allosterically inhibits the CRP-like protein (Clp) of Xanthomonas axonopodis pv. citri

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3146058

Rules for RNA recognition of GNRA tetraloops deduced by in vitro selection: comparison with in vivo evolution

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3146058

Second messenger-mediated adjustment of bacterial swimming velocity

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3146058

A simple solid-phase synthesis of the ubiquitous bacterial signaling molecule, c-di-GMP and analogues

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3146058

Processing of X-ray diffraction data collected in oscillation mode

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20690679

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1021/BI100671E

1 reference

2224915

2224915

1 reference

1 reference

1 reference