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DNA-directed RNA polymerase II core subunit RPO21 YDL140C (Q27549483)

From Wikidata

fungal protein found in Saccharomyces cerevisiae S288c

YDL140C
RPO21
DNA-directed RNA polymerase II core subunit RPO21

Language	Label	Description	Also known as
default for all languages	No label defined
English	DNA-directed RNA polymerase II core subunit RPO21 YDL140C	fungal protein found in Saccharomyces cerevisiae S288c	YDL140C RPO21 DNA-directed RNA polymerase II core subunit RPO21

Statements

1 reference

25 May 2022

UniProt protein ID

1 reference

10 December 2016

RNA polymerase Rpb1, domain 7 superfamily

1 reference

InterPro Release 71.0

http://www.ebi.ac.uk/interpro/protein/P04050

RNA polymerase Rpb1, funnel domain superfamily

1 reference

InterPro Release 71.0

http://www.ebi.ac.uk/interpro/protein/P04050

RNA polymerase Rpb1, domain 4, protein family

1 reference

based on heuristic

inferred from protein domain or family

RNA polymerase Rpb1, domain 5, protein family

1 reference

based on heuristic

inferred from protein domain or family

RNA polymerase Rpb1, domain 1, protein family

1 reference

based on heuristic

inferred from protein domain or family

RNA polymerase Rpb1, domain 6, protein family

1 reference

based on heuristic

inferred from protein domain or family

RNA polymerase Rpb1, domain 7, protein family

1 reference

based on heuristic

inferred from protein domain or family

RNA polymerase, N-terminal domain, protein family

1 reference

based on heuristic

inferred from protein domain or family

RNA polymerase Rpb1, domain 3, protein family

1 reference

based on heuristic

inferred from protein domain or family

RNA polymerase, alpha subunit, protein family

1 reference

based on heuristic

inferred from protein domain or family

RNA polymerase II, heptapeptide repeat, eukaryotic, protein family

1 reference

based on heuristic

inferred from protein domain or family

Saccharomyces cerevisiae S288c

1 reference

25 May 2022

UniProt protein ID

1 reference

25 May 2022

UniProt protein ID

molecular function

metal ion binding

determination method or standard

1 reference

14 February 2019

UniProt protein ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

nucleotidyltransferase activity

determination method or standard

1 reference

14 February 2019

UniProt protein ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

RNA-directed 5'-3' RNA polymerase activity

determination method or standard

1 reference

14 February 2019

Molecular basis of RNA-dependent RNA polymerase II activity

Saccharomyces Genome Database ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

RNA polymerase II activity

determination method or standard

1 reference

27 March 2018

Purified yeast RNA polymerase II reads through intrinsic blocks to elongation in response to the yeast TFIIS analogue, P37.

Saccharomyces Genome Database ID

http://www.ebi.ac.uk/QuickGO/annotations?protein=P04050&geneProductId=UniProtKB:P04050

determination method or standard

transferase activity

determination method or standard

1 reference

14 February 2019

UniProt protein ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

protein binding

determination method or standard

10 references

14 February 2019

RNA polymerase II elongation factors of Saccharomyces cerevisiae: a targeted proteomics approach

IntAct protein interaction database

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

14 February 2019

Nrd1 interacts with the nuclear exosome for 3' processing of RNA polymerase II transcripts

IntAct protein interaction database

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

14 February 2019

The positions of TFIIF and TFIIE in the RNA polymerase II transcription preinitiation complex.

IntAct protein interaction database

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

14 February 2019

Pol II CTD kinases Bur1 and Kin28 promote Spt5 CTR-independent recruitment of Paf1 complex

IntAct protein interaction database

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

14 February 2019

Evidence that Spt4, Spt5, and Spt6 control transcription elongation by RNA polymerase II in Saccharomyces cerevisiae

IntAct protein interaction database

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

14 February 2019

The Glc7 phosphatase subunit of the cleavage and polyadenylation factor is essential for transcription termination on snoRNA genes.

IntAct protein interaction database

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

14 February 2019

Proteome survey reveals modularity of the yeast cell machinery

IntAct protein interaction database

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

14 February 2019

The Paf1 complex physically and functionally associates with transcription elongation factors in vivo

IntAct protein interaction database

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

14 February 2019

The Nrd1–Nab3–Sen1 termination complex interacts with the Ser5-phosphorylated RNA polymerase II C-terminal domain

IntAct protein interaction database

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

14 February 2019

Multiple protein/protein and protein/RNA interactions suggest roles for yeast DNA/RNA helicase Sen1p in transcription, transcription-coupled DNA repair and RNA processing

IntAct protein interaction database

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

determination method or standard

3 references

14 February 2019

UniProt protein ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

14 February 2019

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

14 February 2019

Biochemical Analysis of Yeast Suppressor of Ty 4/5 (Spt4/5) Reveals the Importance of Nucleic Acid Interactions in the Prevention of RNA Polymerase II Arrest

Saccharomyces Genome Database ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

RNA polymerase II activity

determination method or standard

DNA-directed 5'-3' RNA polymerase activity

determination method or standard

3 references

14 February 2019

UniProt protein ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

14 February 2019

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

14 February 2019

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

RNA polymerase II, core complex

determination method or standard

4 references

27 March 2018

http://www.ebi.ac.uk/QuickGO/annotations?protein=P04050&geneProductId=UniProtKB:P04050

determination method or standard

27 March 2018

Reconstitution of transcription with five purified initiation factors and RNA polymerase II from Saccharomyces cerevisiae

Saccharomyces Genome Database ID

http://www.ebi.ac.uk/QuickGO/annotations?protein=P04050&geneProductId=UniProtKB:P04050

determination method or standard

27 March 2018

RNA polymerase II subunit composition, stoichiometry, and phosphorylation

Saccharomyces Genome Database ID

http://www.ebi.ac.uk/QuickGO/annotations?protein=P04050&geneProductId=UniProtKB:P04050

determination method or standard

27 March 2018

Subunits shared by eukaryotic nuclear RNA polymerases

Saccharomyces Genome Database ID

http://www.ebi.ac.uk/QuickGO/annotations?protein=P04050&geneProductId=UniProtKB:P04050

determination method or standard

cytoplasmic stress granule

determination method or standard

1 reference

14 February 2019

ATPase-Modulated Stress Granules Contain a Diverse Proteome and Substructure.

Saccharomyces Genome Database ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

RNA polymerase II, core complex

determination method or standard

5 references

14 February 2019

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

14 February 2019

Reconstitution of transcription with five purified initiation factors and RNA polymerase II from Saccharomyces cerevisiae

Saccharomyces Genome Database ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

14 February 2019

Subunits shared by eukaryotic nuclear RNA polymerases

Saccharomyces Genome Database ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

14 February 2019

RNA polymerase II subunit composition, stoichiometry, and phosphorylation

Saccharomyces Genome Database ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

14 February 2019

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

determination method or standard

3 references

14 February 2019

UniProt protein ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

14 February 2019

Rtp1p is a karyopherin-like protein required for RNA polymerase II biogenesis.

Community Assessment of Community Annotation with Ontologies

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

14 February 2019

Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress

Saccharomyces Genome Database ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

determination method or standard

biological process

translesion synthesis

determination method or standard

1 reference

14 February 2019

Mechanism of Translesion Transcription by RNA Polymerase II and Its Role in Cellular Resistance to DNA Damage

Saccharomyces Genome Database ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

transcription, DNA-templated

determination method or standard

1 reference

14 February 2019

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

transcription, RNA-templated

determination method or standard

1 reference

14 February 2019

Gene Ontology Consortium

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P04050

determination method or standard

RNA polymerase Rpb1, domain 3

1 reference

InterPro Release 71.0

http://www.ebi.ac.uk/interpro/protein/P04050

RNA polymerase Rpb1, domain 6

1 reference

InterPro Release 71.0

http://www.ebi.ac.uk/interpro/protein/P04050

RNA polymerase, alpha subunit

1 reference

InterPro Release 71.0

http://www.ebi.ac.uk/interpro/protein/P04050

RNA polymerase Rpb1, domain 5

1 reference

InterPro Release 71.0

http://www.ebi.ac.uk/interpro/protein/P04050

RNA polymerase II, heptapeptide repeat, eukaryotic

1 reference

InterPro Release 71.0

http://www.ebi.ac.uk/interpro/protein/P04050

RNA polymerase Rpb1, domain 7

1 reference

InterPro Release 71.0

http://www.ebi.ac.uk/interpro/protein/P04050

RNA polymerase, N-terminal

1 reference

InterPro Release 71.0

http://www.ebi.ac.uk/interpro/protein/P04050

RNA polymerase Rpb1, domain 4

1 reference

InterPro Release 71.0

http://www.ebi.ac.uk/interpro/protein/P04050

RNA polymerase Rpb1, domain 1

1 reference

InterPro Release 71.0

http://www.ebi.ac.uk/interpro/protein/P04050

Identifiers

RefSeq protein ID

1 reference

20 March 2022

UniProt protein ID

1 reference

25 May 2022

UniProt protein ID

Ensembl protein ID

1 reference

ensembl Release 106

Ensembl protein ID

Saccharomyces Genome Database ID

1 reference

20 March 2022

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

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