The native microbiome of the nematode Caenorhabditis elegans: gateway to a new host-microbiome model (Q27304981)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27160191%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

title

The native microbiome of the nematode Caenorhabditis elegans: gateway to a new host-microbiome model (English)

1 reference

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4 April 2020

main subject

Caenorhabditis elegans

0 references

0 references

10

1 reference

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4 April 2020

Vienna Kowallik

9

1 reference

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4 April 2020

author name string

Philipp Dirksen

1

1 reference

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4 April 2020

Sarah Arnaud Marsh

2

1 reference

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4 April 2020

Ines Braker

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27160191%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

Nele Heitland

4

1 reference

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4 April 2020

Sophia Wagner

5

1 reference

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4 April 2020

Rania Nakad

6

1 reference

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4 April 2020

Sebastian Mader

7

1 reference

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4 April 2020

Carola Petersen

8

1 reference

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4 April 2020

Hinrich Schulenburg

12

1 reference

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4 April 2020

Marie-Anne Félix

11

1 reference

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4 April 2020

language of work or name

English

0 references

publication date

9 May 2016

1 reference

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4 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27160191%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

volume

14

1 reference

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4 April 2020

issue

1

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page(s)

38

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describes a project that uses

4 April 2020

ggplot2

object named as

ggplot2

2 references

10 June 2022

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=pmc&rettype=xml&id=4860760

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

exact match

https://scigraph.springernature.com/pub.10.1186/s12915-016-0258-1

0 references

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21 March 2017

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Assembly of the Caenorhabditis elegans gut microbiota from diverse soil microbial environments

21 March 2017

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Host Biology in Light of the Microbiome: Ten Principles of Holobionts and Hologenomes

21 March 2017

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Animals in a bacterial world, a new imperative for the life sciences

21 March 2017

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Evolution of mammals and their gut microbes

21 March 2017

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21 March 2017

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7 April 2017

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7 April 2017

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7 April 2017

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Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

7 April 2017

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APE: Analyses of Phylogenetics and Evolution in R language

7 April 2017

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ITS primers with enhanced specificity for basidiomycetes--application to the identification of mycorrhizae and rusts

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Host-gut microbiota metabolic interactions

7 April 2017

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Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

7 April 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Maintenance of C. elegans

7 April 2017

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An immunomodulatory molecule of symbiotic bacteria directs maturation of the host immune system

7 April 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations

7 April 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Changes in intestinal microflora of Caenorhabditis elegans following Bacillus nematocida B16 infection

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Reclassification of Serpens flexibilis Hespell 1977 as Pseudomonas flexibilis comb. nov., with Pseudomonas tuomuerensis Xin et al. 2009 as a later heterotypic synonym.

28 September 2017

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Ten years of life in compost: temporal and spatial variation of North German Caenorhabditis elegans populations.

28 September 2017

1 reference

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The laboratory domestication of Caenorhabditis elegans.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Why we need more ecology for genetic models such as C. elegans

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Lipid droplet protein LID-1 mediates ATGL-1-dependent lipolysis during fasting in Caenorhabditis elegans

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Alterations of the human gut microbiome in liver cirrhosis

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Food, pathogen, signal: The multifaceted nature of a bacterial diet

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

The prevalence of Caenorhabditis elegans across 1.5 years in selected North German locations: the importance of substrate type, abiotic parameters, and Caenorhabditis competitors

28 September 2017

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Ribosomal Database Project: data and tools for high throughput rRNA analysis

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Commensals, probiotics and pathogens in the Caenorhabditis elegans model

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Towards a unified paradigm for sequence-based identification of fungi

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Microbiota-mediated colonization resistance against intestinal pathogens

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Microbiota-liberated host sugars facilitate post-antibiotic expansion of enteric pathogens

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Worms need microbes too: microbiota, health and aging in Caenorhabditis elegans

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Culture-independent investigation of the microbiome associated with the nematode Acrobeloides maximus

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

The hologenomic basis of speciation: gut bacteria cause hybrid lethality in the genus Nasonia

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Diet-induced developmental acceleration independent of TOR and insulin in C. elegans

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Association with soil bacteria enhances p38-dependent infection resistance in Caenorhabditis elegans

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Targeted restoration of the intestinal microbiota with a simple, defined bacteriotherapy resolves relapsing Clostridium difficile disease in mice

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Population dynamics and habitat sharing of natural populations of Caenorhabditis elegans and C. briggsae

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Caenorhabditis elegans immune conditioning with the probiotic bacterium Lactobacillus acidophilus strain NCFM enhances gram-positive immune responses

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Competition and resilience between founder and introduced bacteria in the Caenorhabditis elegans gut.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Metaorganisms as the new frontier

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

The natural history of Caenorhabditis elegans

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Multilocus sequence typing supports the hypothesis that Ochrobactrum anthropi displays a human-associated subpopulation

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Caenorhabditis elegans genomic response to soil bacteria predicts environment-specific genetic effects on life history traits

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Adhesion of Conidia of Drechmeria coniospora to Caenorhabditis elegans Wild Type and Mutants.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Role of microorganisms in the evolution of animals and plants: the hologenome theory of evolution

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Natural variation and population genetics of Caenorhabditis elegans

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Influence of lactic acid bacteria on longevity of Caenorhabditis elegans and host defense against salmonella enterica serovar enteritidis

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Long-term maintenance of species-specific bacterial microbiota in the basal metazoan Hydra

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Evolutionary history of Caenorhabditis elegans inferred from microsatellites: evidence for spatial and temporal genetic differentiation and the occurrence of outbreeding

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Food transport in the C. elegans pharynx

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Virulence factors of the human opportunistic pathogen Serratia marcescens identified by in vivo screening

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

A simple model host for identifying Gram-positive virulence factors

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Occurrence of natural dixenic associations between the symbiont Photorhabdus luminescens and bacteria related to Ochrobactrum spp. in tropical entomopathogenic Heterorhabditis spp. (Nematoda, Rhabditida).

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Symbiont recognition and subsequent morphogenesis as early events in an animal-bacterial mutualism

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Role of candida in pathogenesis of antibiotic-associated diarrhoea in elderly inpatients

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

Niches, population structure and genome reduction in Ochrobactrum intermedium: clues to technology-driven emergence of pathogens

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4860760

A fasting-responsive signaling pathway that extends life span in C. elegans

31 May 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12915-016-0258-1

Salmonella typhimurium proliferates and establishes a persistent infection in the intestine of Caenorhabditis elegans.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12915-016-0258-1

Reproductive fitness and dietary choice behavior of the genetic model organism Caenorhabditis elegans under semi-natural conditions

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12915-016-0258-1

Unusual regulation of a STAT protein by an SLC6 family transporter in C. elegans epidermal innate immunity

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12915-016-0258-1

Models of Caenorhabditis elegans infection by bacterial and fungal pathogens.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12915-016-0258-1

AMPLIFICATION AND DIRECT SEQUENCING OF FUNGAL RIBOSOMAL RNA GENES FOR PHYLOGENETICS

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12915-016-0258-1

Canonical Correspondence Analysis: A New Eigenvector Technique for Multivariate Direct Gradient Analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12915-016-0258-1

10.1186/S12915-016-0258-1

21 January 2018

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27160191%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

4 April 2020

1010060690

0 references

OpenCitations bibliographic resource ID

1779666

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1779666

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27160191%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27160191%20AND%20SRC:MED&resulttype=core&format=json