Comparative analyses of six solanaceous transcriptomes reveal a high degree of sequence conservation and species-specific transcripts. (Q24816738)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16162286%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

title

Comparative analyses of six solanaceous transcriptomes reveal a high degree of sequence conservation and species-specific transcripts (English)

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6 January 2020

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4

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6 January 2020

author name string

Willem Albert Rensink

1

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6 January 2020

Yuandan Lee

2

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6 January 2020

Jia Liu

3

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6 January 2020

Shu Ouyang

5

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6 January 2020

C Robin Buell

6

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6 January 2020

language of work or name

English

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publication date

14 September 2005

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6 January 2020

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6 January 2020

volume

6

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issue

1

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page(s)

124

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Creative Commons Attribution 2.0 Generic

6 January 2020

copyright license

start time

14 September 2005

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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April 2022 Public Data File from Crossref

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limma

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limma

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22 June 2022

https://europepmc.org/article/PMC/1249569

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inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

The Genomes of Oryza sativa: a history of duplications

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1249569

Cross-species hybridisation of human and bovine orthologous genes on high density cDNA microarrays

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1249569

Biologically meaningful expression profiling across species using heterologous hybridization to a cDNA microarray

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1249569

Gene ontology: tool for the unification of biology

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1249569

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1249569

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1249569

A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. japonica)

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1249569

A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. indica)

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1249569

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1249569

Linear models and empirical bayes methods for assessing differential expression in microarray experiments

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1249569

Rapid cDNA sequencing (expressed sequence tags) from a directionally cloned human infant brain cDNA library

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1249569

A comparative genetic linkage map of eggplant (Solanum melongena) and its implications for genome evolution in the solanaceae

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1249569

The institute for genomic research Osa1 rice genome annotation database

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1249569

A comprehensive gene expression analysis toward the understanding of growth and differentiation of tobacco BY-2 cells.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1249569

Comprehensive EST analysis of tomato and comparative genomics of fruit ripening

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1249569

Analysis of the transcriptional complexity of Arabidopsis thaliana by massively parallel signature sequencing

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1249569

Virus-induced gene silencing in plants.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1249569

Comparative analyses of potato expressed sequence tag libraries

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1249569

Conservation of gene function in the solanaceae as revealed by comparative mapping of domestication traits in eggplant.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1249569

Comparison of RNA expression profiles based on maize expressed sequence tag frequency analysis and micro-array hybridization

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1249569

Cross-referencing eukaryotic genomes: TIGR Orthologous Gene Alignments (TOGA)

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1249569

The TIGR Gene Indices: analysis of gene transcript sequences in highly sampled eukaryotic species

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1249569

Candidate gene analysis of organ pigmentation loci in the Solanaceae.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1249569

Comparative genetics of disease resistance within the solanaceae

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1249569

Two classes of genes in plants

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1249569

Genome mapping in capsicum and the evolution of genome structure in the solanaceae.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1249569

Computational identification and characterization of novel genes from legumes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1249569

High density molecular linkage maps of the tomato and potato genomes

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1249569

RFLP Maps Based on a Common Set of Clones Reveal Modes of Chromosomal Evolution in Potato and Tomato

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1249569

Annotation of the Arabidopsis genome

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1249569

Gene expression profiling of potato responses to cold, heat, and salt stress

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16162286

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Compositional properties of homologous coding sequences from plants

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16162286

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-6-124

1 reference

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Dimensions Publication ID

6 January 2020

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/1471-2164-6-124

OpenCitations bibliographic resource ID

1882422

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16162286%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

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