The mitochondrial transcription termination factor mTERF modulates replication pausing in human mitochondrial DNA (Q24669735)

2

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Aurelio Reyes

3

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Sjoerd Wanrooij

4

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Takehiro Yasukawa

5

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Pekka J Karhunen

6

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Johannes N Spelbrink

7

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Ian J Holt

8

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Howard T Jacobs

Roles for the human ATP-dependent Lon protease in mitochondrial DNA maintenance

9

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language of work or name

English

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publication date

2007

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published in

Nucleic Acids Research

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volume

35

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issue

19

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page(s)

6458-74

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cites work

1 reference

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Contrahelicase activity of the mitochondrial transcription termination factor mtDBP

7 April 2017

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Phosphorylation of rat mitochondrial transcription termination factor (mTERF) is required for transcription termination but not for binding to DNA

7 April 2017

1 reference

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The human mitochondrial transcription termination factor (mTERF) is a multizipper protein but binds to DNA as a monomer, with evidence pointing to intramolecular leucine zipper interactions.

7 April 2017

1 reference

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Sequence and organization of the human mitochondrial genome

7 April 2017

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Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4

7 April 2017

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The replication fork barrier site forms a unique structure with Fob1p and inhibits the replication fork

7 April 2017

1 reference

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S-phase checkpoint proteins Tof1 and Mrc1 form a stable replication-pausing complex

7 April 2017

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The Saccharomyces Pif1p DNA helicase and the highly related Rrm3p have opposite effects on replication fork progression in ribosomal DNA.

7 April 2017

1 reference

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Regulation of DNA replication fork progression through damaged DNA by the Mec1/Rad53 checkpoint

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Mitochondrial transcription factor A is necessary for mtDNA maintenance and embryogenesis in mice

7 April 2017

1 reference

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Expression of catalytic mutants of the mtDNA helicase Twinkle and polymerase POLG causes distinct replication stalling phenotypes.

7 April 2017

1 reference

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Replication fork barriers: pausing for a break or stalling for time?

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Cloning of the sea urchin mitochondrial RNA polymerase and reconstitution of the transcription termination system

28 September 2017

1 reference

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Mutational bias suggests that replication termination occurs near the dif site, not at Ter sites: what's the Dif?

28 September 2017

1 reference

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Mitochondrial transcription and its regulation in mammalian cells

28 September 2017

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Dissection of mammalian replicators by a novel plasmid stability assay

28 September 2017

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The AAA+ protein ATAD3 has displacement loop binding properties and is involved in mitochondrial nucleoid organization.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Replication of vertebrate mitochondrial DNA entails transient ribonucleotide incorporation throughout the lagging strand.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Alterations to the expression level of mitochondrial transcription factor A, TFAM, modify the mode of mitochondrial DNA replication in cultured human cells

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

A molecular mousetrap determines polarity of termination of DNA replication in E. coli

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

The Drosophila termination factor DmTTF regulates in vivo mitochondrial transcription

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Mutant mitochondrial helicase Twinkle causes multiple mtDNA deletions and a late-onset mitochondrial disease in mice

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Cloning and functional analysis of human mTERFL encoding a novel mitochondrial transcription termination factor-like protein

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

The mating type switch-activating protein Sap1 Is required for replication fork arrest at the rRNA genes of fission yeast.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Replication termination in Escherichia coli: structure and antihelicase activity of the Tus-Ter complex

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

A bidirectional origin of replication maps to the major noncoding region of human mitochondrial DNA.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Mechanisms of transcription-replication collisions in bacteria

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Swi1 and Swi3 are components of a replication fork protection complex in fission yeast.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

A monomer-to-trimer transition of the human mitochondrial transcription termination factor (mTERF) is associated with a loss of in vitro activity

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Transcription termination factor reb1p causes two replication fork barriers at its cognate sites in fission yeast ribosomal DNA in vivo.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Transcription-dependent recombination and the role of fork collision in yeast rDNA.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

DmTTF, a novel mitochondrial transcription termination factor that recognises two sequences of Drosophila melanogaster mitochondrial DNA.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Sir2p suppresses recombination of replication forks stalled at the replication fork barrier of ribosomal DNA in Saccharomyces cerevisiae.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Replication and transcription of mammalian mitochondrial DNA.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Transcription termination factor TTF-I exhibits contrahelicase activity during DNA replication

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Sea urchin mtDBP is a two-faced transcription termination factor with a biased polarity depending on the RNA polymerase.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Prominent mitochondrial DNA recombination intermediates in human heart muscle.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

In vivo functional analysis of the human mitochondrial DNA polymerase POLG expressed in cultured human cells

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Coupled leading- and lagging-strand synthesis of mammalian mitochondrial DNA.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Characterization of the effects of Escherichia coli replication terminator protein (Tus) on transcription reveals dynamic nature of the tus block to transcription complex progression

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Cloning and characterisation of mtDBP, a DNA-binding protein which binds two distinct regions of sea urchin mitochondrial DNA.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

In vivo mitochondrial DNA-protein interactions in sea urchin eggs and embryos

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Initiation of mitochondrial DNA replication by transcription and R-loop processing

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

The relationship between sequence-specific termination of DNA replication and transcription.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Selection of protein binding sites from random nucleic acid sequences

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Protein binding to a single termination-associated sequence in the mitochondrial DNA D-loop region

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Two distinct, sequence-specific DNA-binding proteins interact independently with the major replication pause region of sea urchin mtDNA.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

When replication forks stop

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Molecular characterization of the transcription termination factor from human mitochondria

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Replication of animal mitochondrial DNA.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Synthesis and turnover of mitochondrial ribonucleic acid in HeLa cells: the mature ribosomal and messenger ribonucleic acid species are metabolically unstable

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

A tridecamer DNA sequence supports human mitochondrial RNA 3'-end formation in vitro

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Human mitochondrial transcription termination exhibits RNA polymerase independence and biased bipolarity in vitro.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

A family of putative transcription termination factors shared amongst metazoans and plants

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Impairment of replication fork progression mediates RNA polII transcription-associated recombination

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

The Saccharomyces cerevisiae helicase Rrm3p facilitates replication past nonhistone protein-DNA complexes

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Termination of mammalian rDNA replication: polar arrest of replication fork movement by transcription termination factor TTF-I.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Mitochondrial DNA transcription initiation and termination using mitochondrial lysates from cultured human cells.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Termination of transcription in human mitochondria: identification and purification of a DNA binding protein factor that promotes termination

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

Specific interaction of the murine transcription termination factor TTF I with class-I RNA polymerases

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2095818

MTERF3, the most conserved member of the mTERF-family, is a modular factor involved in mitochondrial protein synthesis.

30 May 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKM676

Mammalian mitochondrial DNA replicates bidirectionally from an initiation zone.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKM676

Biased incorporation of ribonucleotides on the mitochondrial L-strand accounts for apparent strand-asymmetric DNA replication.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKM676

New DNA-binding activity of rat mitochondrial transcription termination factor (mTERF).

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKM676

The synthesis of mRNA in isolated mitochondria can be maintained for several hours and is inhibited by high levels of ATP.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKM676

Dna2 helicase/nuclease causes replicative fork stalling and double-strand breaks in the ribosomal DNA of Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKM676

Essentiality, not expressiveness, drives gene-strand bias in bacteria.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKM676

DNA knotting caused by head-on collision of transcription and replication

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKM676

Co-localization of polar replication fork barriers and rRNA transcription terminators in mouse rDNA

21 January 2018

1 reference

12 December 2020

Bidirectional replication initiates at sites throughout the mitochondrial genome of birds

1 reference

12 December 2020

Sap1p binds to Ter1 at the ribosomal DNA of Schizosaccharomyces pombe and causes polar replication fork arrest

1 reference

12 December 2020

DNA light-strand preferential recognition of human mitochondria transcription termination factor mTERF

1 reference

12 December 2020

Termination factor-mediated DNA loop between termination and initiation sites drives mitochondrial rRNA synthesis

1 reference

12 December 2020

Conserved sequence box II directs transcription termination and primer formation in mitochondria

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12 December 2020

Human mtDNA sublimons resemble rearranged mitochondrial genoms found in pathological states

1 reference

12 December 2020

Binding of the replication terminator protein Fob1p to the Ter sites of yeast causes polar fork arrest

1 reference

12 December 2020

Replication origins and pause sites in sea urchin mitochondrial DNA

1 reference

12 December 2020

Transcription-induced deletions in Escherichia coli plasmids

1 reference

12 December 2020

Mechanistic studies on the impact of transcription on sequence-specific termination of DNA replication and vice versa

1 reference

12 December 2020

Multiple protein-binding sites in the TAS-region of human and rat mitochondrial DNA

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12 December 2020

Identifiers

DOI

10.1093/NAR/GKM676

1 reference

2110870

2110870

1 reference

1 reference

1 reference