FinO is an RNA chaperone that facilitates sense-antisense RNA interactions (Q24633970)

2

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Michael J Gubbins

3

0 references

Ross A Edwards

4

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Laura S Frost

5

0 references

J N Mark Glover

describes a project that uses

6

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language of work or name

English

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publication date

1 December 2003

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published in

The EMBO Journal

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volume

22

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page(s)

6346-55

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issue

23

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ImageQuant

1 reference

Europe PubMed Central

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC291848/fullTextXML

inferred from PubMed Central ID database lookup

cites work

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Crystal structures of complexes of PcrA DNA helicase with a DNA substrate indicate an inchworm mechanism

7 April 2017

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Hepatitis C virus NS3 RNA helicase domain with a bound oligonucleotide: the crystal structure provides insights into the mode of unwinding

7 April 2017

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Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure

7 April 2017

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The DEAH-box protein PRP22 is an ATPase that mediates ATP-dependent mRNA release from the spliceosome and unwinds RNA duplexes

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The Sm-like Hfq protein increases OxyS RNA interaction with target mRNAs

7 April 2017

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Degradation of FinP antisense RNA from F-like plasmids: the RNA-binding protein, FinO, protects FinP from ribonuclease E

7 April 2017

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Hfq: a bacterial Sm-like protein that mediates RNA-RNA interaction

7 April 2017

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Episome-mediated transfer of drug resistance in Enterobacteriaceae. I. Transfer of resistance factors by conjugation

7 April 2017

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The ubiquitous nature of RNA chaperone proteins

27 September 2017

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RNA chaperones exist and DEAD box proteins get a life

27 September 2017

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Probing FinO-FinP RNA interactions by site-directed protein-RNA crosslinking and gelFRET.

27 September 2017

1 reference

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HIV-1 nucleocapsid protein as a nucleic acid chaperone: spectroscopic study of its helix-destabilizing properties, structural binding specificity, and annealing activity

27 September 2017

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HIV-1 nucleocapsid protein activates transient melting of least stable parts of the secondary structure of TAR and its complementary sequence

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291848

Bulged residues promote the progression of a loop-loop interaction to a stable and inhibitory antisense-target RNA complex

27 September 2017

1 reference

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A general model for nucleic acid helicases and their "coupling" within macromolecular machines

27 September 2017

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Crawling and wiggling on DNA: structural insights to the mechanism of DNA unwinding by helicases

27 September 2017

1 reference

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In vitro analysis of the interaction between the FinO protein and FinP antisense RNA of F-like conjugative plasmids

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291848

Salmonella virulence plasmid. Modular acquisition of the spv virulence region by an F-plasmid in Salmonella enterica subspecies I and insertion into the chromosome of subspecies II, IIIa, IV and VII isolates

27 September 2017

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Recent horizontal transmission of plasmids between natural populations of Escherichia coli and Salmonella enterica

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291848

RNA chaperones and the RNA folding problem

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291848

Nucleotide sequences of five IncF plasmid finP alleles

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291848

The DEAH-box splicing factor Prp16 unwinds RNA duplexes in vitro

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291848

Protein-facilitated RNA folding

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291848

Characterization of the F plasmid TraJ protein synthesized in F' and Hfr strains of Escherichia coli K-12.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291848

finP and fisO mutations in FinP anti-sense RNA suggest a model for FinOP action in the repression of bacterial conjugation by the Flac plasmid JCFL0.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291848

Repression and derepression of conjugation of plasmid R1 by wild-type and mutated finP antisense RNA

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291848

The transcriptional control of fertility in F-like plasmids

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291848

The FinOP repressor system of plasmid R1: analysis of the antisense RNA control of traJ expression and conjugative DNA transfer.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291848

The nature of the transfer inhibitor of several F-like plasmids.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291848

Characterizing the structural features of RNA/RNA interactions of the F-plasmid FinOP fertility inhibition system.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291848

Selective strand annealing and selective strand exchange promoted by the N-terminal domain of hepatitis delta antigen

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291848

Two basic regions of NCp7 are sufficient for conformational conversion of HIV-1 dimerization initiation site from kissing-loop dimer to extended-duplex dimer

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291848

The FinO protein of IncF plasmids binds FinP antisense RNA and its target, traJ mRNA, and promotes duplex formation.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291848

IS1-mediated tandem duplication of plasmid pBR322. Dependence on recA and on DNA polymerase I.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291848

Complex formed by complementary RNA stem-loops and its stabilization by a protein: Function of ColE1 Rom protein

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=291848

Dissecting RNA-protein interactions: RNA-RNA recognition by Rop

28 November 2018

1 reference

12 December 2020

The FinO Repressor of Bacterial Conjugation Contains Two RNA Binding Regions†

1 reference

12 December 2020

FinOP repression of the F plasmid involves extension of the half-life of FinP antisense RNA by FinO

1 reference

12 December 2020

Nucleic-acid-chaperone activity of retroviral nucleocapsid proteins: significance for viral replication

1 reference

12 December 2020

Analysis of the major domains of the F fertility inhibition protein, FinO

1 reference

12 December 2020

Antisense RNA regulation in prokaryotes: rapid RNA/RNA interaction facilitated by a general U-turn loop structure

1 reference

12 December 2020

Nucleic acid conformational changes essential for HIV-1 nucleocapsid protein-mediated inhibition of self-priming in minus-strand transfer

1 reference

12 December 2020

Complexes formed by complementary RNA stem-loops. Their formations, structures and interaction with ColE1 Rom protein

1 reference

12 December 2020

Promoters in the transfer region of plasmid F

1 reference

12 December 2020

Tumour suppressors, kinases and clamps: how p53 regulates the cell cycle in response to DNA damage.

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Negative feedback regulation of wild-type p53 biosynthesis.

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Transcriptional regulation of the PCNA promoter by p53.

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Effect of tumor suppressors on cell cycle-regulatory genes: RB suppresses p34cdc2 expression and normal p53 suppresses cyclin A expression.

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Transcription by RNA polymerases I and III: a potential link between cell growth, protein synthesis and the retinoblastoma protein

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Polypeptide hormone production by "carcinoid" apudomas and their relevant cytochemistry

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Regulation of pre-transfer RNA synthesis during transition from resting to growing state

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Regulation of RNA polymerase III transcription in response to F9 embryonal carcinoma stem cell differentiation

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Conditional inhibition of transformation and of cell proliferation by a temperature-sensitive mutant of p53.

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Wild-type but not mutant p53 immunopurified proteins bind to sequences adjacent to the SV40 origin of replication

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

The TATA-binding protein and associated factors are components of pol III transcription factor TFIIIB.

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

A TBP complex essential for transcription from TATA-less but not TATA-containing RNA polymerase III promoters is part of the TFIIIB fraction.

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Transcriptional activation by p53 correlates with suppression of growth but not transformation.

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

p53, the cellular gatekeeper for growth and division

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Activation of transcription factor IIIC by the adenovirus E1A protein.

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Biochemical properties and biological effects of p53.

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Regulation of RNA polymerases I and III by the retinoblastoma protein: a mechanism for growth control?

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Mice deficient for p53 are developmentally normal but susceptible to spontaneous tumours

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Wild-type p53 activates transcription in vitro

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Specific repression of TATA-mediated but not initiator-mediated transcription by wild-type p53.

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Retinoblastoma protein. Another role rolls in.

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Repression of RNA polymerase III transcription by the retinoblastoma protein

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Repression of the interleukin 6 gene promoter by p53 and the retinoblastoma susceptibility gene product

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Wild-type p53 can down-modulate the activity of various promoters

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Growth suppression induced by wild-type p53 protein is accompanied by selective down-regulation of proliferating-cell nuclear antigen expression

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Wild-type p53 binds to the TATA-binding protein and represses transcription

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Human TAFII31 protein is a transcriptional coactivator of the p53 protein

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

The ability to associate with activation domains in vitro is not required for the TATA box-binding protein to support activated transcription in vivo

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

The Dr1/DRAP1 heterodimer is a global repressor of transcription in vivo

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

RNA polymerase III transcription repressed by Rb through its interactions with TFIIIB and TFIIIC2

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Mechanistic analysis of RNA polymerase III regulation by the retinoblastoma protein

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Repression of the basal c-fos promoter by wild-type p53

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

p53: puzzle and paradigm

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Transcription from a TATA-less promoter requires a multisubunit TFIID complex

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Cellular localization and cell cycle regulation by a temperature-sensitive p53 protein

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Wild-type p53 mediates positive regulation of gene expression through a specific DNA sequence element

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

p53-dependent repression of CDK4 translation in TGF-beta-induced G1 cell-cycle arrest

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

RNA polymerase III. Genes, factors and transcriptional specificity.

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

p53 mutations in human cancers

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Identification of p53 as a sequence-specific DNA-binding protein

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

p53 transcriptional activation mediated by coactivators TAFII40 and TAFII60

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Differential regulation of RNA polymerases I, II, and III by the TBP-binding repressor Dr1.

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Expression and function of a human initiator tRNA gene in the yeast Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

p53 is covalently linked to 5.8S rRNA.

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

The p53 activation domain binds the TATA box-binding polypeptide in Holo-TFIID, and a neighboring p53 domain inhibits transcription

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

The ribosomal L5 protein is associated with mdm-2 and mdm-2-p53 complexes

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Two domains of p53 interact with the TATA-binding protein, and the adenovirus 13S E1A protein disrupts the association, relieving p53-mediated transcriptional repression

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Cell cycle regulation of RNA polymerase III transcription

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Mitotic regulation of a TATA-binding-protein-containing complex

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Functional interaction between DP-1 and p53

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

RNA polymerase III transcription from the human U6 and adenovirus type 2 VAI promoters has different requirements for human BRF, a subunit of human TFIIIB

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

p53 inhibits RNA polymerase III-directed transcription in a promoter-dependent manner

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Functional interaction between p53, the TATA-binding protein (TBP), andTBP-associated factors in vivo.

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Cytoplasmic p53 polypeptide is associated with ribosomes

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2FCDG607

7 January 2021

Identifiers

DOI

10.1093/EMBOJ/CDG607

1 reference

2591216

2591216

1 reference

1 reference

1 reference