Multi-protein complexes in eukaryotic gene transcription (Q22122454)

30 July 2017

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title

Multi-protein complexes in eukaryotic gene transcription (English)

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30 July 2017

Ernest Martinez

1

Ernest

Martinez

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30 July 2017

2002

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1 December 2002

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30 July 2017

Plant Molecular Biology

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Crossref

30 July 2017

50

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30 July 2017

925-947

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30 July 2017

6

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ADA1, a novel component of the ADA/GCN5 complex, has broader effects than GCN5, ADA2, or ADA3.

30 July 2017

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12 December 2020

New core promoter element in RNA polymerase II-dependent transcription: sequence-specific DNA binding by transcription factor IIB

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12 December 2020

UV-damaged DNA-binding protein in the TFTC complex links DNA damage recognition to nucleosome acetylation

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12 December 2020

The TAF(II)250 subunit of TFIID has histone acetyltransferase activity

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12 December 2020

Assembly of recombinant TFIID reveals differential coactivator requirements for distinct transcriptional activators

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12 December 2020

Identification of Arabidopsis histone deacetylase HDA6 mutants that affect transgene expression

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12 December 2020

The pseudorabies immediate early protein stimulates in vitro transcription by facilitating TFIID: promoter interactions

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12 December 2020

Histone deacetylases: silencers for hire.

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12 December 2020

Structural organization of yeast and mammalian mediator complexes

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12 December 2020

TBP-associated factors are not generally required for transcriptional activation in yeast

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12 December 2020

Transcriptional activation: risky business

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12 December 2020

A subset of TAF(II)s are integral components of the SAGA complex required for nucleosome acetylation and transcriptional stimulation

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12 December 2020

SAGA is an essential in vivo target of the yeast acidic activator Gal4p

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12 December 2020

Structure and function of a human TAFII250 double bromodomain module

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12 December 2020

Characterization and functional analysis of Arabidopsis TFIIA reveal that the evolutionarily unconserved region of the large subunit has a transcription activation domain.

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12 December 2020

Biochemistry and structural biology of transcription factor IID (TFIID)

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12 December 2020

Transcription initiation from TATA-less promoters within eukaryotic protein-coding genes

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12 December 2020

Purification, cloning, and characterization of a human coactivator, PC4, that mediates transcriptional activation of class II genes

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12 December 2020

Histone acetyltransferase complexes stabilize swi/snf binding to promoter nucleosomes.

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12 December 2020

The many HATs of transcription coactivators

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12 December 2020

Ubiquitin-activating/conjugating activity of TAFII250, a mediator of activation of gene expression in Drosophila

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12 December 2020

Global transcription regulators of eukaryotes

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12 December 2020

A mechanism for TAFs in transcriptional activation: activation domain enhancement of TFIID-TFIIA--promoter DNA complex formation

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12 December 2020

Mediator of Transcriptional Regulation

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12 December 2020

Crystal structure of a TFIIB-TBP-TATA-element ternary complex

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12 December 2020

TFIIA interacts with TFIID via association with TATA-binding protein and TAF40

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12 December 2020

Core promoter-specific function of a mutant transcription factor TFIID defective in TATA-box binding

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12 December 2020

Dissecting the regulatory circuitry of a eukaryotic genome

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12 December 2020

Transcription factor IIA derepresses TATA-binding protein (TBP)-associated factor inhibition of TBP-DNA binding

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12 December 2020

TAFII250 is a bipartite protein kinase that phosphorylates the base transcription factor RAP74

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12 December 2020

Distinct mechanisms promote polarity establishment in carpels of Arabidopsis

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12 December 2020

Novel cofactors and TFIIA mediate functional core promoter selectivity by the human TAFII150-containing TFIID complex

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12 December 2020

Interaction of a gene-specific transcription factor with the adenovirus major late promoter upstream of the TATA box region.

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12 December 2020

Topoisomerase I enhances TFIID-TFIIA complex assembly during activation of transcription

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12 December 2020

Molecular biology. The histone modification circus.

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12 December 2020

Thyroid hormone receptor-associated proteins and general positive cofactors mediate thyroid hormone receptor function in the absence of the TATA box-binding protein-associated factors of TFIID.

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12 December 2020

A tale of histone modifications

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12 December 2020

Rb targets histone H3 methylation and HP1 to promoters

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12 December 2020

TBP-associated factors (TAFIIs): multiple, selective transcriptional mediators in common complexes

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12 December 2020

Binding of transcription factor TFIID to the major late promoter during in vitro nucleosome assembly potentiates subsequent initiation by RNA polymerase II

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12 December 2020

A human SPT3-TAFII31-GCN5-L acetylase complex distinct from transcription factor IID

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12 December 2020

Drosophila TFIID binds to a conserved downstream basal promoter element that is present in many TATA-box-deficient promoters

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12 December 2020

NuA4, an essential transcription adaptor/histone H4 acetyltransferase complex containing Esa1p and the ATM-related cofactor Tra1p

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12 December 2020

Redundant roles for the TFIID and SAGA complexes in global transcription

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12 December 2020

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12 December 2020

Yeast NC2 associates with the RNA polymerase II preinitiation complex and selectively affects transcription in vivo

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12 December 2020

PICKLE is a CHD3 chromatin-remodeling factor that regulates the transition from embryonic to vegetative development in Arabidopsis

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12 December 2020

Taf(II) 250 phosphorylates human transcription factor IIA on serine residues important for TBP binding and transcription activity

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12 December 2020

The TFIID components human TAF(II)140 and Drosophila BIP2 (TAF(II)155) are novel metazoan homologues of yeast TAF(II)47 containing a histone fold and a PHD finger

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12 December 2020

Yeast nuclear extract contains two major forms of RNA polymerase II mediator complexes

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12 December 2020

Considerations of transcriptional control mechanisms: do TFIID-core promoter complexes recapitulate nucleosome-like functions?

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12 December 2020

A multiprotein mediator of transcriptional activation and its interaction with the C-terminal repeat domain of RNA polymerase II.

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12 December 2020

Chromatin, TAFs, and a novel multiprotein coactivator are required for synergistic activation by Sp1 and SREBP-1a in vitro

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12 December 2020

Loss of Gcn5l2 leads to increased apoptosis and mesodermal defects during mouse development

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12 December 2020

Transcription factor TFIID recruits factor CPSF for formation of 3' end of mRNA

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12 December 2020

The language of covalent histone modifications

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12 December 2020

Transcription activation via enhanced preinitiation complex assembly in a human cell-free system lacking TAFIIs.

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12 December 2020

Different functional domains of TAFII250 modulate expression of distinct subsets of mammalian genes

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12 December 2020

The role of general initiation factors in transcription by RNA polymerase II

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12 December 2020

Transcription from a TATA-less promoter requires a multisubunit TFIID complex

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12 December 2020

Orchestrated response: a symphony of transcription factors for gene control

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12 December 2020

Characterization of mediator complexes from HeLa cell nuclear extract

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12 December 2020

Crystal structure of a yeast TFIIA/TBP/DNA complex

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12 December 2020

The USA-derived transcriptional coactivator PC2 is a submodule of TRAP/SMCC and acts synergistically with other PCs

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12 December 2020

Ordered recruitment of transcription and chromatin remodeling factors to a cell cycle- and developmentally regulated promoter.

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12 December 2020

Reconstitution of human TFIIA activity from recombinant polypeptides: a role in TFIID-mediated transcription

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12 December 2020

Mechanism of action of a yeast activator: Direct effect of GAL4 derivatives on mammalian TFIID-promoter interactions

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12 December 2020

A novel mediator of class II gene transcription with homology to viral immediate-early transcriptional regulators

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12 December 2020

Activation of the TFIID-TFIIA complex with HMG-2

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12 December 2020

Highly conserved core domain and unique N terminus with presumptive regulatory motifs in a human TATA factor (TFIID).

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12 December 2020

A dynamic model for PC4 coactivator function in RNA polymerase II transcription

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12 December 2020

The enhanceosome and transcriptional synergy.

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12 December 2020

Identification and analysis of the Arabidopsis thaliana BSH gene, a member of the SNF5 gene family

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12 December 2020

Molecular mechanism of nucleotide excision repair.

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12 December 2020

Promoter-selective properties of the TBP-related factor TRF1.

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12 December 2020

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12 December 2020

The acidic activator GAL4-AH can stimulate polymerase II transcription by promoting assembly of a closed complex requiring TFIID and TFIIA

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12 December 2020

Acetylation: a regulatory modification to rival phosphorylation?

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12 December 2020

Functional organization of the yeast SAGA complex: distinct components involved in structural integrity, nucleosome acetylation, and TATA-binding protein interaction.

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12 December 2020

A multisubunit complex associated with the RNA polymerase II CTD and TATA-binding protein in yeast.

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12 December 2020

The Spt components of SAGA facilitate TBP binding to a promoter at a post-activator-binding step in vivo

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12 December 2020

Molecular structure of human TFIIH

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12 December 2020

Mammalian TAF(II)30 is required for cell cycle progression and specific cellular differentiation programmes

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12 December 2020

Histone-like TAFs within the PCAF histone acetylase complex

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12 December 2020

Association of transcription factor IIA with TATA binding protein is required for transcriptional activation of a subset of promoters and cell cycle progression in Saccharomyces cerevisiae

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12 December 2020

Multiple TAFIIs directing synergistic activation of transcription

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12 December 2020

Alteration of nucleosome structure as a mechanism of transcriptional regulation

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12 December 2020

DNA binding site selection by RNA polymerase II TAFs: a TAF(II)250-TAF(II)150 complex recognizes the initiator

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12 December 2020

Molecular cloning of the small (gamma) subunit of human TFIIA reveals functions critical for activated transcription

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12 December 2020

Distinct but overlapping roles of histone acetylase PCAF and of the closely related PCAF-B/GCN5 in mouse embryogenesis

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12 December 2020

Acetylation of general transcription factors by histone acetyltransferases

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12 December 2020

Identification of a general transcription factor TFIIAalpha/beta homolog selectively expressed in testis

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12 December 2020

The coactivator p15 (PC4) initiates transcriptional activation during TFIIA-TFIID-promoter complex formation

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12 December 2020

Cloning of an intrinsic human TFIID subunit that interacts with multiple transcriptional activators

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12 December 2020

The S. cerevisiae SAGA complex functions in vivo as a coactivator for transcriptional activation by Gal4.

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12 December 2020

Holo-TFIID supports transcriptional stimulation by diverse activators and from a TATA-less promoter

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12 December 2020

Arabidopsis thaliana contains two genes for TFIID

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12 December 2020

SPT3 interacts with TFIID to allow normal transcription in Saccharomyces cerevisiae

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12 December 2020

Transcriptional coactivator complexes

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12 December 2020

Topology and reorganization of a human TFIID–promoter complex

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12 December 2020

Mammalian GCN5 and P/CAF acetyltransferases have homologous amino-terminal domains important for recognition of nucleosomal substrates

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12 December 2020

Function of TAF(II)-containing complex without TBP in transcription by RNA polymerase II

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12 December 2020

Transcription factor ATF interacts with the TATA factor to facilitate establishment of a preinitiation complex

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12 December 2020

Analysis of core promoter sequences located downstream from the TATA element in the hsp70 promoter from Drosophila melanogaster

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12 December 2020

ATP-dependent nucleosome remodeling and histone hyperacetylation synergistically facilitate transcription of chromatin

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12 December 2020

Histone acetyltransferases

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12 December 2020

Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution

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12 December 2020

Negative regulation of Gcn4 and Msn2 transcription factors by Srb10 cyclin-dependent kinase

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12 December 2020

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12 December 2020

Chromatin remodeling enzymes: who's on first?

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12 December 2020

Mechanism of transcription initiation and promoter escape by RNA polymerase II.

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12 December 2020

TAFs mediate transcriptional activation and promoter selectivity

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12 December 2020

Transcriptional regulation by the immediate early protein of pseudorabies virus during in vitro nucleosome assembly

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12 December 2020

Yeast TAF(II)90 is required for cell-cycle progression through G2/M but not for general transcription activation

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12 December 2020

Structural basis of transcription: RNA polymerase II at 2.8 angstrom resolution

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12 December 2020

A testis-specific transcription factor IIA (TFIIAtau) stimulates TATA-binding protein-DNA binding and transcription activation

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12 December 2020

A general mechanism for transcriptional synergy by eukaryotic activators

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12 December 2020

Electron crystal structure of the transcription factor and DNA repair complex, core TFIIH.

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12 December 2020

Identification of TATA-binding protein-free TAFII-containing complex subunits suggests a role in nucleosome acetylation and signal transduction

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12 December 2020

Distinct classes of yeast promoters revealed by differential TAF recruitment

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12 December 2020

Acetylation of histones and transcription-related factors

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12 December 2020

The ADA complex is a distinct histone acetyltransferase complex in Saccharomyces cerevisiae

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12 December 2020

Bromodomain factor 1 corresponds to a missing piece of yeast TFIID.

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12 December 2020

Arabidopsis thaliana RNA polymerase II subunits related to yeast and human RPB5

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12 December 2020

A mediator required for activation of RNA polymerase II transcription in vitro

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12 December 2020

Mediator-nucleosome interaction

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12 December 2020

Yeast TAF(II)145 functions as a core promoter selectivity factor, not a general coactivator

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12 December 2020

Mechanism of transcriptional activation by Sp1: evidence for coactivators

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12 December 2020

Inhibition of TATA-binding protein function by SAGA subunits Spt3 and Spt8 at Gcn4-activated promoters

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12 December 2020

Molecular genetics of the RNA polymerase II general transcriptional machinery

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12 December 2020

The human TFIID components TAF(II)135 and TAF(II)20 and the yeast SAGA components ADA1 and TAF(II)68 heterodimerize to form histone-like pairs

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12 December 2020

Mechanism of synergy between TATA and initiator: synergistic binding of TFIID following a putative TFIIA-induced isomerization

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12 December 2020

Transcription activation in cells lacking TAFIIS.

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12 December 2020

Regulation of transcription by a protein methyltransferase

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12 December 2020

Recycling of the general transcription factors during RNA polymerase II transcription

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12 December 2020

Structural basis of preinitiation complex assembly on human pol II promoters

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12 December 2020

General requirement for RNA polymerase II holoenzymes in vivo

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12 December 2020

A p300/CBP-associated factor that competes with the adenoviral oncoprotein E1A

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12 December 2020

Sin meets NuRD and other tails of repression.

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12 December 2020

Crystal structure of the yeast TFIIA/TBP/DNA complex

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12 December 2020

Chromatin remodeling in plants

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12 December 2020

A class of activation domains interacts directly with TFIIA and stimulates TFIIA-TFIID-promoter complex assembly

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12 December 2020

A transcription reinitiation intermediate that is stabilized by activator

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12 December 2020

Human STAGA complex is a chromatin-acetylating transcription coactivator that interacts with pre-mRNA splicing and DNA damage-binding factors in vivo

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12 December 2020

TATA-binding protein-associated factor(s) in TFIID function through the initiator to direct basal transcription from a TATA-less class II promoter.

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12 December 2020

Crystal structure of negative cofactor 2 recognizing the TBP-DNA transcription complex

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12 December 2020

Activation domain-specific and general transcription stimulation by native histone acetyltransferase complexes

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12 December 2020

TBP-like factors come into focus

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12 December 2020

Involvement of negative cofactor NC2 in active repression by zinc finger-homeodomain transcription factor AREB6

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12 December 2020

Eukaryotic transcription factor-DNA complexes.

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12 December 2020

Turning genes off by Ssn6-Tup1: a conserved system of transcriptional repression in eukaryotes

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12 December 2020

TAF-Containing and TAF-independent forms of transcriptionally active TBP in vivo.

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12 December 2020

The general transcription factors of RNA polymerase II

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12 December 2020

An RNA polymerase II holoenzyme responsive to activators

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12 December 2020

Isolation and characterization of cDNAs encoding transcription factor IIB from Arabidopsis and soybean

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12 December 2020

A histone octamer-like structure within TFIID

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12 December 2020

TFIIH: a key component in multiple DNA transactions

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12 December 2020

Methylation of histone H4 at arginine 3 facilitating transcriptional activation by nuclear hormone receptor

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12 December 2020

Transcriptional adaptor and histone acetyltransferase proteins in Arabidopsis and their interactions with CBF1, a transcriptional activator involved in cold-regulated gene expression

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12 December 2020

ATP-dependent chromatin-remodeling complexes.

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12 December 2020

Drosophila Mediator complex is broadly utilized by diverse gene-specific transcription factors at different types of core promoters

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12 December 2020

TAFII-independent activation mediated by human TBP in the presence of the positive cofactor PC4

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12 December 2020

A histone fold TAF octamer within the yeast TFIID transcriptional coactivator

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12 December 2020

Transcriptional activators direct histone acetyltransferase complexes to nucleosomes

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12 December 2020

Recent structural insights into transcription preinitiation complexes

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12 December 2020

A basal transcription factor that activates or represses transcription.

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12 December 2020

Transcriptional regulation through Mediator-like coactivators in yeast and metazoan cells

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12 December 2020

Is plant gene expression regulated globally?

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12 December 2020

DNA template and activator-coactivator requirements for transcriptional synergism by Drosophila bicoid

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12 December 2020

A chromatin remodelling complex involved in transcription and DNA processing.

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12 December 2020

Cell cycle-regulated histone acetylation required for expression of the yeast HO gene

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12 December 2020

The downstream core promoter element, DPE, is conserved from Drosophila to humans and is recognized by TAFII60 of Drosophila

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12 December 2020

Analysis of the yeast transcription factor TFIIA: distinct functional regions and a polymerase II-specific role in basal and activated transcription

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12 December 2020

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12 December 2020

TAFs and TFIIA mediate differential utilization of the tandem Adh promoters

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12 December 2020

Histone acetyltransferase activity of yeast Gcn5p is required for the activation of target genes in vivo

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12 December 2020

Robust mRNA transcription in chicken DT40 cells depleted of TAF(II)31 suggests both functional degeneracy and evolutionary divergence

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12 December 2020

Yeast Gcn5 functions in two multisubunit complexes to acetylate nucleosomal histones: characterization of an Ada complex and the SAGA (Spt/Ada) complex

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12 December 2020

The C-terminal domain-phosphorylated IIO form of RNA polymerase II is associated with the transcription repressor NC2 (Dr1/DRAP1) and is required for transcription activation in human nuclear extracts

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12 December 2020

Assembly of the isomerized TFIIA--TFIID--TATA ternary complex is necessary and sufficient for gene activation.

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12 December 2020

Critical residues for histone acetylation by Gcn5, functioning in Ada and SAGA complexes, are also required for transcriptional function in vivo

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12 December 2020

Role of general and gene-specific cofactors in the regulation of eukaryotic transcription

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12 December 2020

Isolation and characterization of the Drosophila gene encoding the TATA box binding protein, TFIID.

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12 December 2020

Involvement of the TIP60 histone acetylase complex in DNA repair and apoptosis

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12 December 2020

Identifiers

DOI

10.1023/A:1021258713850

1 reference

PubMed ID

12516863

Dimensions Publication ID

30 July 2017

0 references

1 reference

PubMed ID

12516863