The genome of Rhizobium leguminosarum has recognizable core and accessory components (Q21999715)

26 August 2022

29

Mandy Sanders

Mandy

Sanders

1 reference

26 August 2022

26

Karen Mungall

Karen

Mungall

1 reference

26 August 2022

23

Heidi Hauser

Heidi

Hauser

1 reference

26 August 2022

19

Ann Cronin

Ann

Cronin

1 reference

26 August 2022

16

Inna Cherevach

Inna

Cherevach

1 reference

26 August 2022

14

Carol Churcher

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Churcher

1 reference

26 August 2022

22

Zahra Hance

Zahra

Hance

1 reference

26 August 2022

28

Ester Rabbinowitsch

Ester

Rabbinowitsch

1 reference

26 August 2022

31

Sally Whitehead

Sally

Whitehead

1 reference

26 August 2022

25

Sharon Moule

Sharon

Moule

1 reference

26 August 2022

17

Tracey Chillingworth

Tracey

Chillingworth

1 reference

26 August 2022

27

Halina Norbertczak

Halina

Norbertczak

1 reference

26 August 2022

20

Paul Davis

Paul

Davis

1 reference

26 August 2022

Jonathan D Todd

9

Jonathan D

Todd

1 reference

26 August 2022

Nicholas R Thomson

4

Nicholas R

Thomson

1 reference

26 August 2022

13

Michael A Quail

Michael A

Quail

1 reference

26 August 2022

18

Kay

Clarke

Kay Clarke

1 reference

26 August 2022

2

Lisa C

Crossman

Lisa C Crossman

1 reference

26 August 2022

24

Kay

Jagels

Kay Jagels

1 reference

26 August 2022

15

Claire

Arrowsmith

Claire Arrowsmith

1 reference

26 August 2022

J Peter W Young

1

J Peter W

Young

1 reference

26 August 2022

Andrew W B Johnston

3

Andrew WB

Johnston

1 reference

26 August 2022

Zara F Ghazoui

5

Zara F

Ghazoui

1 reference

26 August 2022

Katherine H Hull

6

Katherine H

Hull

1 reference

26 August 2022

Margaret Wexler

7

Margaret

Wexler

1 reference

26 August 2022

Andrew R J Curson

8

Andrew RJ

Curson

1 reference

26 August 2022

Philip S Poole

10

Philip S

Poole

1 reference

26 August 2022

Tim H Mauchline

11

Tim H

Mauchline

1 reference

26 August 2022

Alison K East

12

Alison K

East

1 reference

26 August 2022

Audrey Fraser

21

Audrey

Fraser

1 reference

26 August 2022

Mark Simmonds

30

Mark

Simmonds

1 reference

Creative Commons Attribution 2.0 Generic

26 August 2022

language of work or name

English

0 references

publication date

2006

0 references

26 April 2006

2 references

2 November 2019

2 September 2020

2 references

2 November 2019

2 September 2020

7

0 references

issue

4

0 references

page(s)

R34

0 references

copyright license

2 references

Europe PubMed Central

2 November 2019

https://scigraph.springernature.com/pub.10.1186/gb-2006-7-4-r34

Europe PubMed Central

2 September 2020

0 references

0 references

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Genome Sequence of the Plant Pathogen and Biotechnology Agent Agrobacterium tumefaciens C58

19 March 2017

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Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18

19 March 2017

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Genome sequence of enterohaemorrhagic Escherichia coli O157:H7

19 March 2017

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Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

19 March 2017

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Artemis: sequence visualization and annotation

19 March 2017

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Improved microbial gene identification with GLIMMER

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Complete Genomic Sequence of Nitrogen-fixing Symbiotic Bacterium Bradyrhizobium japonicum USDA110

19 March 2017

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The genome of the natural genetic engineer Agrobacterium tumefaciens C58

19 March 2017

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Complete Genome Structure of the Nitrogen-fixing Symbiotic Bacterium Mesorhizobium loti

19 March 2017

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Infection and invasion of roots by symbiotic, nitrogen-fixing rhizobia during nodulation of temperate legumes

19 March 2017

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An ecological perspective on bacterial biodiversity

19 March 2017

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Evolutionary rates analysis of Leguminosae implicates a rapid diversification of lineages during the tertiary

19 March 2017

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Amelioration of bacterial genomes: rates of change and exchange

7 April 2017

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7 April 2017

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Legume symbiotic nitrogen fixation by beta-proteobacteria is widespread in nature

12 September 2017

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12 September 2017

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On the genetic basis of variation and heterogeneity of DNA base composition

12 September 2017

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What are bacterial species?

12 September 2017

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The extracytoplasmic function (ECF) sigma factors

12 September 2017

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Spatial regulation of cytokinesis in bacteria

12 September 2017

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The composite genome of the legume symbiont Sinorhizobium meliloti

12 September 2017

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Intraspecies variation in bacterial genomes: the need for a species genome concept

12 September 2017

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Structural elements required for replication and incompatibility of the Rhizobium etli symbiotic plasmid

12 September 2017

1 reference

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Finding families for genomic ORFans

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Genome signature comparisons among prokaryote, plasmid, and mitochondrial DNA

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Polarity of DNA strand exchange promoted by recombination proteins of the RecA family

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Combining diverse evidence for gene recognition in completely sequenced bacterial genomes.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Three phylogenetic groups of nodA and nifH genes in Sinorhizobium and Mesorhizobium isolates from leguminous trees growing in Africa and Latin America.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Compositional biases of bacterial genomes and evolutionary implications

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Heterogeneity of genomes: measures and values

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Functions of the gene products of Escherichia coli.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Dinucleotide relative abundance extremes: a genomic signature

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Evidence for horizontal gene transfer in Escherichia coli speciation

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Over- and under-representation of short oligonucleotides in DNA sequences

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

CSD2, CSD3, and CSD4, genes required for chitin synthesis in Saccharomyces cerevisiae: the CSD2 gene product is related to chitin synthases and to developmentally regulated proteins in Rhizobium species and Xenopus laevis

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Microarray-based detection and typing of the Rhizobium nodulation gene nodC: potential of DNA arrays to diagnose biological functions of interest

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Bacterial genomes as new gene homes: the genealogy of ORFans in E. coli

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Higher diversity of Rhizobium leguminosarum biovar viciae populations in arable soils than in grass soils

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

FnrN controls symbiotic nitrogen fixation and hydrogenase activities in Rhizobium leguminosarum biovar viciae UPM791.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

A new DNA sequence assembly program

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Characterization of RFRS9, a second member of the Rhizobium fredii repetitive sequence family from the nitrogen-fixing symbiont R. fredii USDA257.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Evolutionary Significance of Accessory DNA Elements in Bacteria

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Sequence determination and characterization of the replicator region in the tumor-inducing plasmid pTiB6S3.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Genetic organization of the hydrogen uptake (hup) cluster from Rhizobium leguminosarum.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Molecular characterization and regulation of the rhizosphere-expressed genes rhiABCR that can influence nodulation by Rhizobium leguminosarum biovar viciae

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Glucose catabolism in two derivatives of a Rhizobium japonicum strain differing in nitrogen-fixing efficiency

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Experimental identification and quantification of glucose metabolism in seven bacterial species.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Diversity and specificity of Rhizobium leguminosarum biovar viciae on wild and cultivated legumes

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Functional and regulatory analysis of the two copies of the fixNOQP operon of Rhizobium leguminosarum strain VF39.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Rhizobium leguminosarum bv. viciae contains a second fnr/fixK-like gene and an unusual fixL homologue.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

R Factor Transfer in Rhizobium leguminosarum

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Identification of the Rhizobium Strains in Pea Root Nodules Using Genetic Markers

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

The coexistence of symbiosis and pathogenicity-determining genes in Rhizobium rhizogenes strains enables them to induce nodules and tumors or hairy roots in plants.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Two of the three groEL homologues in Rhizobium leguminosarum are dispensable for normal growth.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Three GroEL homologues from Rhizobium leguminosarum have distinct in vitro properties

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Amino-acid cycling drives nitrogen fixation in the legume–Rhizobium symbiosis

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Gene Import or Deletion: A Study of the Different Genes in Escherichia coli Strains K12 and O157:H7.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

The Rhizobium leguminosarum bv. viciae VF39 gamma-aminobutyrate (GABA) aminotransferase gene (gabT) is induced by GABA and highly expressed in bacteroids

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

The Rhizobium leguminosarum tonB gene is required for the uptake of siderophore and haem as sources of iron

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Codon bias and base composition are poor indicators of horizontally transferred genes.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Sequence Diversity of the Plasmid Replication Gene repC in the Rhizobiaceae

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Nodulating ability of Rhizobium tropici is conditioned by a plasmid-encoded citrate synthase.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557990

Differences in chromosome number and genome rearrangements in the genus Brucella

29 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16640791

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The glutamine synthetases of rhizobia: phylogenetics and evolutionary implications

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16640791

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Evidence that the Rhizobium regulatory protein RirA binds to cis-acting iron-responsive operators (IROs) at promoters of some Fe-regulated genes

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16640791

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/GB-2006-7-4-R34

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2988347

OpenCitations bibliographic resource ID

0 references

2988347

1 reference