A large fraction of extragenic RNA pol II transcription sites overlap enhancers (Q21145794)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20485488%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

title

A large fraction of extragenic RNA pol II transcription sites overlap enhancers (English)

1 reference

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2 February 2020

1

Francesca De Santa

Francesca

De Santa

1 reference

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2 February 2020

2

Iros Barozzi

Iros

Barozzi

1 reference

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2 February 2020

4

Serena Ghisletti

Serena

Ghisletti

1 reference

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2 February 2020

5

Sara Polletti

Sara

Polletti

1 reference

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2 February 2020

7

Heiko Muller

Heiko

Muller

1 reference

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2 February 2020

10

Gioacchino Natoli

Gioacchino

Natoli

1 reference

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2 February 2020

3

Flore

Mietton

Flore Mietton

1 reference

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2 February 2020

author name string

Betsabeh Khoramian Tusi

series ordinal

6

author given names

Betsabeh Khoramian

author last names

Tusi

1 reference

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2 February 2020

Chia-Lin Wei

series ordinal

9

author given names

Chia-Lin

author last names

Wei

1 reference

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2 February 2020

Jiannis Ragoussis

series ordinal

8

author given names

Jiannis

author last names

Ragoussis

1 reference

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2 February 2020

language of work or name

English

0 references

publication date

11 May 2010

1 reference

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2 February 2020

1 reference

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2 February 2020

volume

8

1 reference

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2 February 2020

issue

5

1 reference

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2 February 2020

page(s)

e1000384

1 reference

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Creative Commons Attribution 4.0 International

2 February 2020

copyright license

start time

11 May 2010

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase

19 March 2017

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A novel histone acetyltransferase is an integral subunit of elongating RNA polymerase II holoenzyme

19 March 2017

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Long non-coding RNAs: insights into functions

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19 March 2017

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19 March 2017

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19 March 2017

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19 March 2017

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7 April 2017

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7 April 2017

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7 April 2017

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Divergent transcription from active promoters

7 April 2017

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Kcnq1ot1 antisense noncoding RNA mediates lineage-specific transcriptional silencing through chromatin-level regulation

7 April 2017

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RNA maps reveal new RNA classes and a possible function for pervasive transcription

7 April 2017

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Genome-wide transcription and the implications for genomic organization

7 April 2017

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Chromatin modifications by methylation and ubiquitination: implications in the regulation of gene expression

7 April 2017

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Genome-wide analysis of mammalian promoter architecture and evolution

7 April 2017

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7 April 2017

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Requirement for Xist in X chromosome inactivation

7 April 2017

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Catalogues of mammalian long noncoding RNAs: modest conservation and incompleteness

7 April 2017

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Jmjd3 contributes to the control of gene expression in LPS-activated macrophages

12 September 2017

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Genomic and transcriptional co-localization of protein-coding and long non-coding RNA pairs in the developing brain

12 September 2017

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Transcription factories: gene expression in unions?

12 September 2017

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The FANTOM web resource: from mammalian transcriptional landscape to its dynamic regulation

12 September 2017

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The LPS-induced transcriptional upregulation of the chicken lysozyme locus involves CTCF eviction and noncoding RNA transcription.

12 September 2017

1 reference

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Stepwise chromatin remodelling by a cascade of transcription initiation of non-coding RNAs

12 September 2017

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Transcription regulation through promoter-proximal pausing of RNA polymerase II.

12 September 2017

1 reference

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Noncoding transcription controls downstream promoters to regulate T-cell receptor alpha recombination

12 September 2017

1 reference

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A role for noncoding transcription in activation of the yeast PHO5 gene

12 September 2017

1 reference

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Transcriptional noise and the fidelity of initiation by RNA polymerase II.

12 September 2017

1 reference

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Eukaryotic regulatory RNAs: an answer to the 'genome complexity' conundrum

12 September 2017

1 reference

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The genomic landscape of histone modifications in human T cells

12 September 2017

1 reference

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Interactions of NF-kappaB with chromatin: the art of being at the right place at the right time

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2867938

Jak-STAT signaling pathways in cells of the immune system.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2867938

Chromatin modification by DNA tracking

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2867938

C/EBP, NF-kappa B, and c-Ets family members and transcriptional regulation of the cell-specific and inducible macrophage inflammatory protein 1 alpha immediate-early gene

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2867938

Restriction of interferon gamma responsiveness and basal expression of the myeloid human Fc gamma R1b gene is mediated by a functional PU.1 site and a transcription initiator consensus

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2867938

12 September 2017

The centrality of RNA.

1 reference

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Whole-genome mapping of histone H3 Lys4 and 27 trimethylations reveals distinct genomic compartments in human embryonic stem cells

27 September 2017

1 reference

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Chromatin remodeling and extragenic transcription at the MHC class II locus control region.

27 September 2017

1 reference

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IRF3 mediates a TLR3/TLR4-specific antiviral gene program

27 September 2017

1 reference

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PU.1 induces myeloid lineage commitment in multipotent hematopoietic progenitors

27 September 2017

1 reference

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Intergenic transcription and transinduction of the human beta-globin locus

27 September 2017

1 reference

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A unifying model for the selective regulation of inducible transcription by CpG islands and nucleosome remodeling

27 September 2017

1 reference

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Ripples from neighbouring transcription.

30 May 2018

1 reference

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Intergenic transcription through a polycomb group response element counteracts silencing

30 May 2018

1 reference

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The inhibition of DRB (5,6-dichloro-1-β-d-ribofuranosylbenzimidazole) of hnRNA and mRNA production in HeLa cells

30 May 2018

1 reference

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Intergenic transcription and developmental remodeling of chromatin subdomains in the human beta-globin locus.

30 May 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1000384

Identification and characterization of enhancers controlling the inflammatory gene expression program in macrophages.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1000384

The HS2 enhancer of the beta-globin locus control region initiates synthesis of non-coding, polyadenylated RNAs independent of a cis-linked globin promoter

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1000384

Regulation of B lymphocyte and macrophage development by graded expression of PU.1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1000384

Requirement of transcription factor PU.1 in the development of multiple hematopoietic lineages.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1000384

RNA polymerase II holoenzyme contains SWI/SNF regulators involved in chromatin remodeling

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20485488

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PBIO.1000384

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20485488%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20485488%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

2 references