Single-cell and single-molecule epigenomics to uncover genome regulation at unprecedented resolution (Q90597216)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30559489%20AND%20SRC:MED&resulttype=core&format=json

14 April 2020

title

Single-cell and single-molecule epigenomics to uncover genome regulation at unprecedented resolution (English)

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14 April 2020

1

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14 April 2020

Jason D. Buenrostro

series ordinal

3

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14 April 2020

2

Bradley E Bernstein

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14 April 2020

publication date

17 December 2018

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14 April 2020

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14 April 2020

volume

51

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14 April 2020

page(s)

19-25

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issue

1

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An integrated encyclopedia of DNA elements in the human genome

14 April 2020

cites work

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Integrative analysis of 111 reference human epigenomes

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

The International Human Epigenome Consortium: A Blueprint for Scientific Collaboration and Discovery

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

The accessible chromatin landscape of the human genome

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Genome-wide mapping of in vivo protein-DNA interactions

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Scaling single-cell genomics from phenomenology to mechanism

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

A bivalent chromatin structure marks key developmental genes in embryonic stem cells

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Single-molecule decoding of combinatorially modified nucleosomes

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Single-cell epigenomics: techniques and emerging applications

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Single-cell epigenomics: Recording the past and predicting the future.

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Multiplex single cell profiling of chromatin accessibility by combinatorial cellular indexing

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Highly scalable generation of DNA methylation profiles in single cells

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

The cis-regulatory dynamics of embryonic development at single-cell resolution.

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Single-nucleus analysis of accessible chromatin in developing mouse forebrain reveals cell-type-specific transcriptional regulation.

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Integrative single-cell analysis of transcriptional and epigenetic states in the human adult brain.

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Scaling by shrinking: empowering single-cell 'omics' with microfluidic devices

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Spatially resolved transcriptomics and beyond.

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Cicero Predicts cis-Regulatory DNA Interactions from Single-Cell Chromatin Accessibility Data.

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Integrated Single-Cell Analysis Maps the Continuous Regulatory Landscape of Human Hematopoietic Differentiation.

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Single-cell methylomes identify neuronal subtypes and regulatory elements in mammalian cortex.

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Single-cell ChIP-seq reveals cell subpopulations defined by chromatin state

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Single-cell Hi-C reveals cell-to-cell variability in chromosome structure

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Ever-Changing Landscapes: Transcriptional Enhancers in Development and Evolution

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Forcing cells to change lineages

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Genetic and developmental basis of evolutionary pelvic reduction in threespine sticklebacks

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Chance caught on the wing: cis-regulatory evolution and the origin of pigment patterns in Drosophila

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Systematic localization of common disease-associated variation in regulatory DNA

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Genetic and epigenetic fine mapping of causal autoimmune disease variants

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Lineage-Specific Genome Architecture Links Enhancers and Non-coding Disease Variants to Target Gene Promoters

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Interrogation of human hematopoiesis at single-cell and single-variant resolution

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Epigenetic Memory Underlies Cell-Autonomous Heterogeneous Behavior of Hematopoietic Stem Cells.

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Chromatin accessibility pre-determines glucocorticoid receptor binding patterns.

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Metabolic labeling of RNA uncovers principles of RNA production and degradation dynamics in mammalian cells

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Parallel single-cell sequencing links transcriptional and epigenetic heterogeneity

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

scNMT-seq enables joint profiling of chromatin accessibility DNA methylation and transcription in single cells.

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Studying and modelling dynamic biological processes using time-series gene expression data

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Pioneer transcription factors target partial DNA motifs on nucleosomes to initiate reprogramming

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Core transcriptional regulatory circuitry in human embryonic stem cells

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Droplet barcoding for single-cell transcriptomics applied to embryonic stem cells.

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Oscillatory control of factors determining multipotency and fate in mouse neural progenitors

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Functional roles of pulsing in genetic circuits

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Integrated approaches reveal determinants of genome-wide binding and function of the transcription factor Pho4.

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Systematic Investigation of Transcription Factor Activity in the Context of Chromatin Using Massively Parallel Binding and Expression Assays

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Nature, nurture, or chance: stochastic gene expression and its consequences

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Predictive polymer modeling reveals coupled fluctuations in chromosome conformation and transcription

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Enhancer Regulation of Transcriptional Bursting Parameters Revealed by Forced Chromatin Looping

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Enhancer Control of Transcriptional Bursting

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Phenotypic robustness conferred by apparently redundant transcriptional enhancers

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

RNA imaging. Spatially resolved, highly multiplexed RNA profiling in single cells

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Spatial organization of chromatin domains and compartments in single chromosomes

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Large-scale imputation of epigenomic datasets for systematic annotation of diverse human tissues

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Building a lineage from single cells: genetic techniques for cell lineage tracking

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Dynamic imaging of genomic loci in living human cells by an optimized CRISPR/Cas system

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Transcription-coupled changes in nuclear mobility of mammalian cis-regulatory elements.

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Single-cell genome-wide bisulfite sequencing for assessing epigenetic heterogeneity

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Single-cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed using reduced representation bisulfite sequencing

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Single-cell 5hmC sequencing reveals chromosome-wide cell-to-cell variability and enables lineage reconstruction.

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Single-cell chromatin accessibility reveals principles of regulatory variation

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Genome-wide detection of DNase I hypersensitive sites in single cells and FFPE tissue samples.

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Massively multiplex single-cell Hi-C.

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Single-nucleus Hi-C reveals unique chromatin reorganization at oocyte-to-zygote transition.

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Genome-wide maps of nuclear lamina interactions in single human cells

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Dynamics of nucleosome remodelling by individual ACF complexes

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Imaging live-cell dynamics and structure at the single-molecule level

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Breaking the diffraction barrier: super-resolution imaging of cells

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Super-resolution imaging reveals distinct chromatin folding for different epigenetic states

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Transcription factors: from enhancer binding to developmental control

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

In pursuit of design principles of regulatory sequences

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

Function and information content of DNA methylation

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

The language of covalent histone modifications

1 reference

https://api.crossref.org/works/10.1038%2FS41588-018-0290-X

7 January 2021

10.1038/S41588-018-0290-X

Identifiers

DOI

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14 April 2020

1 reference