Discovery of novel MHC-class I alleles and haplotypes in Filipino cynomolgus macaques (Macaca fascicularis) by pyrosequencing and Sanger sequencing: Mafa-class I polymorphism (Q86091456)

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scientific article published on 08 September 2015

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English	Discovery of novel MHC-class I alleles and haplotypes in Filipino cynomolgus macaques (Macaca fascicularis) by pyrosequencing and Sanger sequencing: Mafa-class I polymorphism	scientific article published on 08 September 2015

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scholarly article

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23 February 2020

Discovery of novel MHC-class I alleles and haplotypes in Filipino cynomolgus macaques (Macaca fascicularis) by pyrosequencing and Sanger sequencing: Mafa-class I polymorphism (English)

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23 February 2020

crab-eating macaque

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Hirohito Ishigaki

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14

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23 February 2020

author name string

Takashi Shiina

1

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Yukiho Yamada

2

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Alice Aarnink

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Shingo Suzuki

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23 February 2020

Anri Masuya

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23 February 2020

Sayaka Ito

6

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23 February 2020

Daisuke Ido

7

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23 February 2020

Hisashi Yamanaka

8

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23 February 2020

Chizuru Iwatani

9

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23 February 2020

Hideaki Tsuchiya

10

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Yasushi Itoh

12

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Kazumasa Ogasawara

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Antoine Blancher

15

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publication date

8 September 2015

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23 February 2020

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23 February 2020

67

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10

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563-578

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23 February 2020

describes a project that uses

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https://scigraph.springernature.com/pub.10.1007/s00251-015-0867-9

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Human embryonic stem cell lines derived from single blastomeres

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

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The IMGT/HLA database

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

MHC class I A loci polymorphism and diversity in three Southeast Asian populations of cynomolgus macaque.

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

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Identification of MHC class I sequences in Chinese-origin rhesus macaques

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genetic diversity of longtail macaques (Macaca fascicularis) on the island of Mauritius: an assessment of nuclear and mitochondrial DNA polymorphisms

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

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Comparative phylogenetics offer new insights into the biogeographic history of Macaca fascicularis and the origin of the Mauritian macaques

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

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The neighbor-joining method: a new method for reconstructing phylogenetic trees

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

IPD--the Immuno Polymorphism Database.

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Study of Cynomolgus monkey (Macaca fascicularis) MhcDRB (Mafa-DRB) polymorphism in two populations.

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

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TimeTree: a public knowledge-base of divergence times among organisms

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

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MHC class I alleles influence set-point viral load and survival time in simian immunodeficiency virus-infected rhesus monkeys

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

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Characterization of MHC class I transcripts of a Malaysian cynomolgus macaque by high-throughput pyrosequencing and EST libraries

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Massive parallel MHC genotyping: titanium that shines.

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Study of cynomolgus monkey (Macaca fascicularis) Mhc DRB gene polymorphism in four populations

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

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Rapid evolution of major histocompatibility complex class I genes in primates generates new disease alleles in humans via hitchhiking diversity

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

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Cost-effective sequence-based nonhuman primate MHC class I genotyping from RNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

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Detection of 14 alleles derived from the MHC class I A locus in cynomolgus monkeys

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

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Memory immune responses against pandemic (H1N1) 2009 influenza virus induced by a whole particle vaccine in cynomolgus monkeys carrying Mafa-A1*052:02

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

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HLA-F and MHC class I open conformers are ligands for NK cell Ig-like receptors

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

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MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

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Comparative genomic analysis of the MHC: the evolution of class I duplication blocks, diversity and complexity from shark to man.

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Analyzing real-time PCR data by the comparative C(T) method

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Allelic diversity within the high frequency Mamu-A2*05/Mane-A2*05 (Mane-A*06)/Mafa-A2*05 family of macaque MHC-A loci

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The MHC E locus in macaques is polymorphic and is conserved between macaques and humans

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Unusually high frequency MHC class I alleles in Mauritian origin cynomolgus macaques.

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

HLA-E is a major ligand for the natural killer inhibitory receptor CD94/NKG2A

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparative sequencing of human and chimpanzee MHC class I regions unveils insertions/deletions as the major path to genomic divergence

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of novel MHC class I sequences in pig-tailed macaques by amplicon pyrosequencing and full-length cDNA cloning and sequencing

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

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Whole genome sequencing of SIV-infected macaques identifies candidate loci that may contribute to host control of virus replication

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

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Rhesus macaque class I duplicon structures, organization, and evolution within the alpha block of the major histocompatibility complex.

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The HLA genomic loci map: expression, interaction, diversity and disease

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Unparalleled complexity of the MHC class I region in rhesus macaques

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genomic sequence analysis of the MHC class I G/F segment in common marmoset (Callithrix jacchus).

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Birth-and-death evolution in primate MHC class I genes: divergence time estimates

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

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Nomenclature report on the major histocompatibility complex genes and alleles of Great Ape, Old and New World monkey species

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

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Mitochondrial DNA sequence phylogeny of 4 populations of the widely distributed cynomolgus macaque (Macaca fascicularis fascicularis).

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Bringing non-human primate research into the post-genomic era: how monkeys are teaching us about elite controllers of HIV/AIDS.

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

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Characterization of pig-tailed macaque classical MHC class I genes: implications for MHC evolution and antigen presentation in macaques.

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of 47 MHC class I sequences in Filipino cynomolgus macaques

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Large-scale comparative mapping of the MHC class I region of predominant haplotypes in Japanese

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Simian immunodeficiency virus SIVmac239 infection of major histocompatibility complex-identical cynomolgus macaques from Mauritius

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Study of MHC class II region polymorphism in the Filipino cynomolgus macaque population

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of Mauritian cynomolgus macaque major histocompatibility complex class I haplotypes by high-resolution pyrosequencing

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

MHC class I A region diversity and polymorphism in macaque species

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Macaque models of human infectious disease

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Novel cynomolgus macaque MHC-DPB1 polymorphisms in three South-East Asian populations

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Application of high-resolution, massively parallel pyrosequencing for estimation of haplotypes and gene expression levels of swine leukocyte antigen (SLA) class I genes.

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of 23 novel MHC class I alleles in cynomolgus macaques of Philippine and Philippine/Mauritius origins.

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Pig-tailed macaques (Macaca nemestrina) possess six MHC-E families that are conserved among macaque species: implication for their binding to natural killer receptor variants

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Induction of pluripotent stem cells from adult human fibroblasts by defined factors

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Major histocompatibility complex genotyping with massively parallel pyrosequencing

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

New generation sequencers as a tool for genotyping of highly polymorphic multilocus MHC system

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The MHC class I genes of the rhesus monkey. Different evolutionary histories of MHC class I and II genes in primates.

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An update of the HLA genomic region, locus information and disease associations: 2004.

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A New Statistical Method for Haplotype Reconstruction from Population Data

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mamu-I: a novel primate MHC class I B-related locus with unusually low variability

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genome sequencing analysis of the 1.8 Mb entire human MHC class I region

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

MhcDRB-sequences from cynomolgus macaques (Macaca fascicularis) of different origin

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nonhuman primate models in the genomic era: a paradigm shift.

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genetic divergence of the rhesus macaque major histocompatibility complex

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A BAC-based contig map of the cynomolgus macaque (Macaca fascicularis) major histocompatibility complex genomic region.

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

MHC class I characterization of Indonesian cynomolgus macaques

1 reference

https://pubmed.ncbi.nlm.nih.gov/26349955

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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