A folding control element for tertiary collapse of a group II intron ribozyme (Q79401541)

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22 December 2019

title

A folding control element for tertiary collapse of a group II intron ribozyme (English)

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22 December 2019

author name string

Christina Waldsich

series ordinal

1

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22 December 2019

Anna Marie Pyle

series ordinal

2

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22 December 2019

publication date

3 December 2006

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Nature Structural & Molecular Biology

22 December 2019

published in

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22 December 2019

volume

14

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22 December 2019

issue

1

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22 December 2019

page(s)

37-44

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https://scigraph.springernature.com/pub.10.1038/nsmb1181

22 December 2019

exact match

0 references

cites work

RNA folding: models and perspectives

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Exposing the kinetic traps in RNA folding

31 March 2020

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Metal ions and RNA folding: a highly charged topic with a dynamic future

31 March 2020

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The Fastest Global Events in RNA Folding: Electrostatic Relaxation and Tertiary Collapse of the Tetrahymena Ribozyme

31 March 2020

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Rapid compaction during RNA folding

31 March 2020

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An obligate intermediate along the slow folding pathway of a group II intron ribozyme

31 March 2020

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A collapsed non-native RNA folding state

31 March 2020

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Architecture and folding mechanism of the Azoarcus Group I Pre-tRNA.

31 March 2020

1 reference

A specific monovalent metal ion integral to the AA platform of the RNA tetraloop receptor

31 March 2020

1 reference

Monovalent ion-mediated folding of the Tetrahymena thermophila ribozyme

31 March 2020

1 reference

Mg2+-dependent compaction and folding of yeast tRNAPhe and the catalytic domain of the B. subtilis RNase P RNA determined by small-angle X-ray scattering

31 March 2020

1 reference

The rate-limiting step in the folding of a large ribozyme without kinetic traps

31 March 2020

1 reference

Visualizing the solvent-inaccessible core of a group II intron ribozyme

31 March 2020

1 reference

Productive folding to the native state by a group II intron ribozyme

31 March 2020

1 reference

An alternative route for the folding of large RNAs: apparent two-state folding by a group II intron ribozyme

31 March 2020

1 reference

Group II introns: structure and catalytic versatility of large natural ribozymes

31 March 2020

1 reference

Comparative and functional anatomy of group II catalytic introns--a review

31 March 2020

1 reference

Frequent use of the same tertiary motif by self-folding RNAs

31 March 2020

1 reference

Multiple tertiary interactions involving domain II of group II self-splicing introns.

31 March 2020

1 reference

Defining functional groups, core structural features and inter-domain tertiary contacts essential for group II intron self-splicing: a NAIM analysis

31 March 2020

1 reference

A tertiary interaction that links active-site domains to the 5' splice site of a group II intron

31 March 2020

1 reference

Linking the group II intron catalytic domains: tertiary contacts and structural features of domain 3.

31 March 2020

1 reference

The phylogenetically predicted base-pairing interaction between alpha and alpha' is required for group II splicing in vitro

31 March 2020

1 reference

Structure and activities of group II introns

31 March 2020

1 reference

Stopped-flow fluorescence spectroscopy of a group II intron ribozyme reveals that domain 1 is an independent folding unit with a requirement for specific Mg2+ ions in the tertiary structure

31 March 2020

1 reference

A chemogenetic approach to RNA function/structure analysis

31 March 2020

1 reference

Metal ion binding sites in a group II intron core

31 March 2020

1 reference

Solution structure of a GAAA tetraloop receptor RNA

31 March 2020

1 reference

Conversion of a group II intron into a new multiple-turnover ribozyme that selectively cleaves oligonucleotides: elucidation of reaction mechanism and structure/function relationships

31 March 2020

1 reference

A single active-site region for a group II intron

31 March 2020

1 reference

Folding of branched RNA species

31 March 2020

1 reference

Group II intron domain 5 facilitates a trans-splicing reaction

31 March 2020

1 reference

Group II introns deleted for multiple substructures retain self-splicing activity

31 March 2020

1 reference

Domains 2 and 3 interact to form critical elements of the group II intron active site

31 March 2020

1 reference

Near native structure in an RNA collapsed state

31 March 2020

1 reference

RNA tertiary interactions mediate native collapse of a bacterial group I ribozyme

31 March 2020

1 reference

Structure of a folding intermediate reveals the interplay between core and peripheral elements in RNA folding

31 March 2020

1 reference

Concordant exploration of the kinetics of RNA folding from global and local perspectives.

31 March 2020

1 reference

Guiding ribozyme cleavage through motif recognition: the mechanism of cleavage site selection by a group ii intron ribozyme

31 March 2020

1 reference

The splicing of yeast mitochondrial group I and group II introns requires a DEAD-box protein with RNA chaperone function

31 March 2020

1 reference

Sequence specificity of a group II intron ribozyme: multiple mechanisms for promoting unusually high discrimination against mismatched targets

31 March 2020

1 reference

Chemical probing of RNA by nucleotide analog interference mapping

31 March 2020

1 reference

Efficient synthesis of nucleic acids heavily modified with non-canonical ribose 2'-groups using a mutantT7 RNA polymerase (RNAP).

31 March 2020

1 reference

A simple method for 3'-labeling of RNA.

31 March 2020

1 reference

Direct measurement of oligonucleotide substrate binding to wild-type and mutant ribozymes from Tetrahymena

31 March 2020

1 reference

Crystal structure of a group I ribozyme domain: principles of RNA packing

31 March 2020

1 reference

31 March 2020

Identifiers

DOI

10.1038/NSMB1181

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17143279%20AND%20SRC:MED&resulttype=core&format=json

22 December 2019

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