Multiple roles of the RNA polymerase beta subunit flap domain in sigma 54-dependent transcription (Q78494964)

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14 December 2019

title

Multiple roles of the RNA polymerase beta subunit flap domain in sigma 54-dependent transcription (English)

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Sivaramesh Wigneshweraraj

14 December 2019

author

1

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14 December 2019

author name string

Konstantin Kuznedelov

2

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14 December 2019

Konstantin Severinov

3

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14 December 2019

Martin Buck

4

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14 December 2019

language of work or name

English

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publication date

6 November 2002

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Journal of Biological Chemistry

14 December 2019

published in

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14 December 2019

volume

278

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14 December 2019

page(s)

3455-3465

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14 December 2019

issue

5

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The interface of sigma with core RNA polymerase is extensive, conserved, and functionally specialized

14 December 2019

cites work

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

Structural basis of transcription initiation: RNA polymerase holoenzyme at 4 A resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

Structural basis of transcription initiation: an RNA polymerase holoenzyme-DNA complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

Mechanochemical ATPases and transcriptional activation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

The bacterial enhancer-dependent sigma(54) (sigma(N)) transcription factor

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

In a class of its own--the RNA polymerase sigma factor sigma 54 (sigma N).

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

Protein-protein interactions mapped by artificial proteases: where sigma factors bind to RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

Dissection of two hallmarks of the open promoter complex by mutation in an RNA polymerase core subunit

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

Conservation of sigma-core RNA polymerase proximity relationships between the enhancer-independent and enhancer-dependent sigma classes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

Beta subunit residues 186-433 and 436-445 are commonly used by Esigma54 and Esigma70 RNA polymerase for open promoter complex formation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 A resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

Conformational flexibility of bacterial RNA polymerase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

A role for interaction of the RNA polymerase flap domain with the sigma subunit in promoter recognition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

Promoter opening by sigma(54) and sigma(70) RNA polymerases: sigma factor-directed alterations in the mechanism and tightness of control

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

A fork junction DNA-protein switch that controls promoter melting by the bacterial enhancer-dependent sigma factor

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

Systematic analysis of sigma54 N-terminal sequences identifies regions involved in positive and negative regulation of transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

Binding of transcriptional activators to sigma 54 in the presence of the transition state analog ADP-aluminum fluoride: insights into activator mechanochemical action

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

Regulatory sequences in sigma 54 localise near the start of DNA melting.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

Sequences in sigmaN determining holoenzyme formation and properties

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

Amino-terminal sequences of sigmaN (sigma54) inhibit RNA polymerase isomerization

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

The bacterial enhancer-binding protein NTRC is a molecular machine: ATP hydrolysis is coupled to transcriptional activation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

Correlating protein footprinting with mutational analysis in the bacterial transcription factor sigma54 (sigmaN).

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

The sigma 54 DNA-binding domain includes a determinant of enhancer responsiveness.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

Protein crosslinking studies suggest that Rhizobium meliloti C4-dicarboxylic acid transport protein D, a sigma 54-dependent transcriptional activator, interacts with sigma 54 and the beta subunit of RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

Mechanism of action of the Escherichia coli phage shock protein PspA in repression of the AAA family transcription factor PspF.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

The transcription initiation pathway of sigma 54 mutants that bypass the enhancer protein requirement. Implications for the mechanism of activation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

Interactions of regulated and deregulated forms of the sigma54 holoenzyme with heteroduplex promoter DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

DNA melting within a binary sigma(54)-promoter DNA complex.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

Isomerization of a binary sigma-promoter DNA complex by transcription activators.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

Sequences in sigma(54) region I required for binding to early melted DNA and their involvement in sigma-DNA isomerisation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

Multiple pathways to bypass the enhancer requirement of sigma 54 RNA polymerase: roles for DNA and protein determinants

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

Competition among seven Escherichia coli sigma subunits: relative binding affinities to the core RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

Kinetic studies and structural models of the association of E. coli sigma(70) RNA polymerase with the lambdaP(R) promoter: large scale conformational changes in forming the kinetically significant intermediates

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

DNA footprints of the two kinetically significant intermediates in formation of an RNA polymerase-promoter open complex: evidence that interactions with start site and downstream DNA induce sequential conformational changes in polymerase and DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

Multisubunit RNA polymerases

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

Binding of the initiation factor sigma(70) to core RNA polymerase is a multistep process

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209442200

21 January 2018

Identifiers

DOI

10.1074/JBC.M209442200

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12424241%20AND%20SRC:MED&resulttype=core&format=json

14 December 2019

1 reference