Characterization of T7 RNA polymerase transcription complexes assembled on nucleic acid scaffolds (Q78290869)

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13 December 2019

title

Characterization of T7 RNA polymerase transcription complexes assembled on nucleic acid scaffolds (English)

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13 December 2019

author name string

Dmitri Temiakov

series ordinal

1

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13 December 2019

Michael Anikin

series ordinal

2

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13 December 2019

William T McAllister

series ordinal

3

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13 December 2019

language of work or name

English

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publication date

25 September 2002

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Journal of Biological Chemistry

13 December 2019

published in

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13 December 2019

volume

277

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13 December 2019

page(s)

47035-47043

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13 December 2019

issue

49

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Processivity in early stages of transcription by T7 RNA polymerase

13 December 2019

cites work

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208923200

Abortive initiation by bacteriophage T3 and T7 RNA polymerases under conditions of limiting substrate

21 January 2018

1 reference

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Interactions of the RNA polymerase of bacteriophage T7 with its promoter during binding and initiation of transcription

21 January 2018

1 reference

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Studies of contacts between T7 RNA polymerase and its promoter reveal features in common with multisubunit RNA polymerases

21 January 2018

1 reference

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T7 promoter release mediated by DNA scrunching

21 January 2018

1 reference

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Model for the mechanism of bacteriophage T7 RNAP transcription initiation and termination

21 January 2018

1 reference

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A model for the mechanism of polymerase translocation

21 January 2018

1 reference

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Kinetic mechanism of transcription initiation by bacteriophage T7 RNA polymerase

21 January 2018

1 reference

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Effects of substitutions in a conserved DX(2)GR sequence motif, found in many DNA-dependent nucleotide polymerases, on transcription by T7 RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208923200

Characterization of halted T7 RNA polymerase elongation complexes reveals multiple factors that contribute to stability

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208923200

Interrupting the template strand of the T7 promoter facilitates translocation of the DNA during initiation, reducing transcript slippage and the release of abortive products

21 January 2018

1 reference

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Promoter clearance by T7 RNA polymerase. Initial bubble collapse and transcript dissociation monitored by base analog fluorescence

21 January 2018

1 reference

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T7 RNA polymerase elongation complex structure and movement

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208923200

The specificity loop of T7 RNA polymerase interacts first with the promoter and then with the elongating transcript, suggesting a mechanism for promoter clearance

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208923200

Crystal structure of bacteriophage T7 RNA polymerase at 3.3 A resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208923200

Structural basis for initiation of transcription from an RNA polymerase-promoter complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208923200

Structure of a transcribing T7 RNA polymerase initiation complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208923200

Structure of T7 RNA polymerase complexed to the transcriptional inhibitor T7 lysozyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208923200

Specific binding of monomeric bacteriophage T3 and T7 RNA polymerases to their respective cognate promoters requires the initiating ribonucleoside triphosphate (GTP).

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208923200

Processivity of T7 RNA polymerase requires the C-terminal Phe882-Ala883-COO- or "foot".

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208923200

Fluorescence characterization of the transcription bubble in elongation complexes of T7 RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208923200

Studies on the interaction of T7 RNA polymerase with a DNA template containing a site-specifically placed psoralen cross-link. I. Characterization of elongation complexes

21 January 2018

1 reference

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Crucial role of the RNA:DNA hybrid in the processivity of transcription.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208923200

Overextended RNA:DNA hybrid as a negative regulator of RNA polymerase II processivity.

21 January 2018

1 reference

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Functional Transcription Elongation Complexes from Synthetic RNA-DNA Bubble Duplexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208923200

RNA displacement pathways during transcription from synthetic RNA-DNA bubble duplexes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208923200

A structural model of transcription elongation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208923200

The stability of abortively cycling T7 RNA polymerase complexes depends upon template conformation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208923200

Kinetic analysis of T7 RNA polymerase-promoter interactions with small synthetic promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208923200

Kinetic analysis of T7 RNA polymerase transcription initiation from promoters containing single-stranded regions

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208923200

Thermodynamic and kinetic measurements of promoter binding by T7 RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208923200

Equilibrium and stopped-flow kinetic studies of interaction between T7 RNA polymerase and its promoters measured by protein and 2-aminopurine fluorescence changes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208923200

Role of open complex instability in kinetic promoter selection by bacteriophage T7 RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208923200

Identification of a minimal binding element within the T7 RNA polymerase promoter

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208923200

The 8-nucleotide-long RNA:DNA hybrid is a primary stability determinant of the RNA polymerase II elongation complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208923200

RNA folding during transcription by T7 RNA polymerase analyzed using the self-cleaving transcript assay

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208923200

Processivity of proteolytically modified forms of T7 RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208923200

Major conformational changes occur during the transition from an initiation complex to an elongation complex by T7 RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M208923200

21 January 2018

Identifiers

DOI

10.1074/JBC.M208923200

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12351656%20AND%20SRC:MED&resulttype=core&format=json

13 December 2019

1 reference