Dynamics of gapped DNA recognition by human polymerase beta (Q77816330)

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8 December 2019

title

Dynamics of gapped DNA recognition by human polymerase beta (English)

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8 December 2019

author name string

Maria J Jezewska

series ordinal

1

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8 December 2019

Roberto Galletto

series ordinal

2

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8 December 2019

Wlodzimierz Bujalowski

series ordinal

3

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8 December 2019

language of work or name

English

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publication date

23 March 2002

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Journal of Biological Chemistry

8 December 2019

number of pages

12

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based on heuristic

inferred from page(s)

published in

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8 December 2019

volume

277

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8 December 2019

issue

23

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8 December 2019

page(s)

20316-20327

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The roles of the eukaryotic DNA polymerases in DNA repair synthesis

8 December 2019

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Eukaryotic DNA polymerases, a growing family

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Requirement of mammalian DNA polymerase-beta in base-excision repair.

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Mismatch-specific thymine DNA glycosylase and DNA polymerase beta mediate the correction of G.T mispairs in nuclear extracts from human cells

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Repair of a synthetic abasic site involves concerted reactions of DNA synthesis followed by excision and ligation

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Proliferating cell nuclear antigen-dependent abasic site repair in Xenopus laevis oocytes: an alternative pathway of base excision DNA repair

21 January 2018

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Effect of DNA polymerase inhibitors on DNA repair in intact and permeable human fibroblasts: evidence that DNA polymerases delta and beta are involved in DNA repair synthesis induced by N-methyl-N'-nitro-N-nitrosoguanidine

21 January 2018

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DNA polymerase beta bypasses in vitro a single d(GpG)-cisplatin adduct placed on codon 13 of the HRAS gene

21 January 2018

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Excision of deoxyribose phosphate residues by DNA polymerase beta during DNA repair

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Structures of ternary complexes of rat DNA polymerase beta, a DNA template-primer, and ddCTP

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Crystal structure of rat DNA polymerase beta: evidence for a common polymerase mechanism

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A structural basis for metal ion mutagenicity and nucleotide selectivity in human DNA polymerase beta

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Function and structure relationships in DNA polymerases

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Human DNA polymerase beta recognizes single-stranded DNA using two different binding modes

21 January 2018

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Transition between different binding modes in rat DNA polymerase beta-ssDNA complexes

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Energetics and specificity of Rat DNA polymerase beta interactions with template-primer and gapped DNA substrates

21 January 2018

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Recognition of template-primer and gapped DNA substrates by the human DNA polymerase beta

21 January 2018

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Multiple-step kinetic mechanisms of the ssDNA recognition process by human polymerase beta in its different ssDNA binding modes

21 January 2018

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Interactions of the 8-kDa domain of rat DNA polymerase beta with DNA

21 January 2018

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Spectroscopic Determination of Tryptophan and Tyrosine in Proteins*

21 January 2018

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Calculation of protein extinction coefficients from amino acid sequence data

21 January 2018

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Interactions of Escherichia coli primary replicative helicase DnaB protein with single-stranded DNA. The nucleic acid does not wrap around the protein hexamer.

21 January 2018

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Global conformational transitions in Escherichia coli primary replicative helicase DnaB protein induced by ATP, ADP, and single-stranded DNA binding. Multiple conformational states of the helicase hexamer.

21 January 2018

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Does single-stranded DNA pass through the inner channel of the protein hexamer in the complex with the Escherichia coli DnaB Helicase? Fluorescence energy transfer studies

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Functional and structural heterogeneity of the DNA binding site of the Escherichia coli primary replicative helicase DnaB protein

21 January 2018

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Complex of Escherichia coli primary replicative helicase DnaB protein with a replication fork: recognition and structure

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Kinetic mechanism of the single-stranded DNA recognition by Escherichia coli replicative helicase DnaB protein. Application of the matrix projection operator technique to analyze stopped-flow kinetics

21 January 2018

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Kinetic mechanism of nucleotide cofactor binding to Escherichia coli replicative helicase DnaB protein. stopped-flow kinetic studies using fluorescent, ribose-, and base-modified nucleotide analogues

21 January 2018

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Multiple-step kinetic mechanism of DNA-independent ATP binding and hydrolysis by Escherichia coli replicative helicase DnaB protein: quantitative analysis using the rapid quench-flow method

21 January 2018

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Kinetic mechanisms of rat polymerase beta-ssDNA interactions. Quantitative fluorescence stopped-flow analysis of the formation of the (Pol beta)(16) and (Pol beta)(5) ssDNA binding mode

21 January 2018

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Anticodon loop of tRNAPhe: structure, dynamics, and Mg2+ binding

21 January 2018

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21 January 2018

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The nature of stacking interactions in polynucleotides. Molecular states in oligo- and polyribocytidylic acids by relaxation analysis

21 January 2018

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DNA polymerase beta: multiple conformational changes in the mechanism of catalysis

21 January 2018

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Peculiar 2-aminopurine fluorescence monitors the dynamics of open complex formation by bacteriophage T7 RNA polymerase

21 January 2018

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21 January 2018

Identifiers

DOI

10.1074/JBC.M200918200

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11912205%20AND%20SRC:MED&resulttype=core&format=json

8 December 2019

1 reference