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Variability in automated assignment of NOESY spectra and three-dimensional structure determination: a test case on three small disulfide-bonded proteins (Q73609296)

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scientific article published on 01 January 2001

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English	Variability in automated assignment of NOESY spectra and three-dimensional structure determination: a test case on three small disulfide-bonded proteins	scientific article published on 01 January 2001

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scholarly article

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11246854%20AND%20SRC:MED&resulttype=core&format=json

5 November 2019

Variability in automated assignment of NOESY spectra and three-dimensional structure determination: a test case on three small disulfide-bonded proteins (English)

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11246854%20AND%20SRC:MED&resulttype=core&format=json

5 November 2019

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P Savarin

1

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5 November 2019

S Zinn-Justin

2

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5 November 2019

B Gilquin

3

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5 November 2019

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1 January 2001

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5 November 2019

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Journal of Biomolecular NMR

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5 November 2019

19

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5 November 2019

1

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5 November 2019

49-62

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5 November 2019

A computer-based protocol for semiautomated assignments and 3D structure determination of proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/11246854

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Calcicludine, a venom peptide of the Kunitz-type protease inhibitor family, is a potent blocker of high-threshold Ca2+ channels with a high affinity for L-type channels in cerebellar granule neurons

1 reference

https://pubmed.ncbi.nlm.nih.gov/11246854

12 December 2020

based on heuristic

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Automated combined assignment of NOESY spectra and three-dimensional protein structure determination

1 reference

https://pubmed.ncbi.nlm.nih.gov/11246854

12 December 2020

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A two-dimensional nuclear Overhauser enhancement (2D NOE) experiment for the elucidation of complete proton-proton cross-relaxation networks in biological macromolecules

1 reference

https://pubmed.ncbi.nlm.nih.gov/11246854

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Floating stereospecific assignment revisited: application to an 18 kDa protein and comparison with J-coupling data

1 reference

https://pubmed.ncbi.nlm.nih.gov/11246854

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Three-Dimensional Structure of κ-Conotoxin PVIIA, a Novel Potassium Channel-Blocking Toxin from Cone Snails,

1 reference

https://pubmed.ncbi.nlm.nih.gov/11246854

12 December 2020

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Calculation of protein structures with ambiguous distance restraints. Automated assignment of ambiguous NOE crosspeaks and disulphide connectivities.

1 reference

https://pubmed.ncbi.nlm.nih.gov/11246854

12 December 2020

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Influence of internal dynamics on accuracy of protein NMR structures: derivation of realistic model distance data from a long molecular dynamics trajectory.

1 reference

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Exploring protein interiors: the role of a buried histidine in the KH module fold

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Automated analysis of NMR assignments and structures for proteins.

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Molecular dynamics and accuracy of NMR structures: effects of error bounds and data removal

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Stereospecific assignments of side-chain protons and characterization of torsion angles in Eglin c.

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Exploring the limits of precision and accuracy of protein structures determined by nuclear magnetic resonance spectroscopy.

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Conformational and functional variability supported by the BPTI fold: solution structure of the Ca2+ channel blocker calcicludine

1 reference

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Evaluation of an algorithm for the automated sequential assignment of protein backbone resonances: a demonstration of the connectivity tracing assignment tools (CONTRAST) software package

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An assessment of the precision and accuracy of protein structures determined by NMR. Dependence on distance errors

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Application of neural networks to automated assignment of NMR spectra of proteins

1 reference

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Automated assignment of simulated and experimental NOESY spectra of proteins by feedback filtering and self-correcting distance geometry

1 reference

https://pubmed.ncbi.nlm.nih.gov/11246854

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Solution structure of Syrian hamster prion protein rPrP(90-231).

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Protein Heteronuclear NMR Assignments Using Mean-Field Simulated Annealing

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Automated 2D NOESY assignment and structure calculation of Crambin(S22/I25) with the self-correcting distance geometry based NOAH/DIAMOD programs

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AQUA and PROCHECK-NMR: programs for checking the quality of protein structures solved by NMR

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A four-disulphide-bridged toxin, with high affinity towards voltage-gated K+ channels, isolated from Heterometrus spinnifer (Scorpionidae) venom

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Calibration of the angular dependence of the amide proton-C alpha proton coupling constants, 3JHN alpha, in a globular protein. Use of 3JHN alpha for identification of helical secondary structure

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A systematic comparison of three structure determination methods from NMR data: dependence upon quality and quantity of data

1 reference

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Computer assignment of the backbone resonances of labelled proteins using two-dimensional correlation experiments

1 reference

https://pubmed.ncbi.nlm.nih.gov/11246854

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Automated peak picking and peak integration in macromolecular NMR spectra using AUTOPSY.

1 reference

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Structural and functional consequences of the presence of a fourth disulfide bridge in the scorpion short toxins: Solution structure of the potassium channel inhibitor HsTX1

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Improved spectral resolution in cosy 1H NMR spectra of proteins via double quantum filtering

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Automated NOESY interpretation with ambiguous distance restraints: the refined NMR solution structure of the pleckstrin homology domain from beta-spectrin

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Strategy for rapid immobilization of prey by a fish-hunting marine snail

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