Cycad Coralloid Roots Contain Bacterial Communities Including Cyanobacteria and Caulobacter spp. That Encode Niche-Specific Biosynthetic Gene Clusters (Q64359167)

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English	Cycad Coralloid Roots Contain Bacterial Communities Including Cyanobacteria and Caulobacter spp. That Encode Niche-Specific Biosynthetic Gene Clusters	article

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13 April 2020

Cycad Coralloid Roots Contain Bacterial Communities Including Cyanobacteria and Caulobacter spp. That Encode Niche-Specific Biosynthetic Gene Clusters (English)

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13 April 2020

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Pablo Cruz-Morales

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Angélica Cibrián-Jaramillo

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Angélica Cibrián-Jaramillo

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Karina Gutiérrez-García

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Edder D Bustos-Díaz

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José Antonio Corona-Gómez

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Hilda E Ramos-Aboites

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Nelly Sélem-Mojica

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Miguel A Pérez-Farrera

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Francisco Barona-Gómez

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Genome Biology and Evolution

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Creative Commons Attribution-NonCommercial 4.0 International

11 December 2018

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Cyanobiont diversity within and among cycads of one field site

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https://pubmed.ncbi.nlm.nih.gov/30534962

12 December 2020

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MODELTEST: testing the model of DNA substitution

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https://pubmed.ncbi.nlm.nih.gov/30534962

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Characterization of indigoidine biosynthetic genes in Erwinia chrysanthemi and role of this blue pigment in pathogenicity

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Linearly concatenated cyclobutane lipids form a dense bacterial membrane

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https://pubmed.ncbi.nlm.nih.gov/30534962

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The cyanobiont in an Azolla fern is neither Anabaena nor Nostoc.

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https://pubmed.ncbi.nlm.nih.gov/30534962

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[Microbial complexes from apogeotropic roots and from rhizosphere of cycad plants]

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[Cyanobacterial community formed during the degradation of apogeotropic roots of cycads]

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[Atypical cell forms overproducing extracellular substances in population of cycad cyanobionts].

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MUSCLE: multiple sequence alignment with high accuracy and high throughput

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Phylogenetic analyses of cyanobacterial genomes: quantification of horizontal gene transfer events

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https://pubmed.ncbi.nlm.nih.gov/30534962

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Proteases in plant root symbiosis.

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Bioactive natural products from marine cyanobacteria for drug discovery

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Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments

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https://pubmed.ncbi.nlm.nih.gov/30534962

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Somatic reduction in cycads.

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The RAST Server: rapid annotations using subsystems technology

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Velvet: algorithms for de novo short read assembly using de Bruijn graphs

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Novel antibacterial azetidine lincosamides

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Myxochelin biosynthesis: direct evidence for two- and four-electron reduction of a carrier protein-bound thioester

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High diversity of cultivable heterotrophic bacteria in association with cyanobacterial water blooms

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Chapter 8. Methods for in silico prediction of microbial polyketide and nonribosomal peptide biosynthetic pathways from DNA sequence data

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Fast and accurate short read alignment with Burrows-Wheeler transform

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High cyanobacterial diversity in coralloid roots of cycads revealed by PCR fingerprinting

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https://pubmed.ncbi.nlm.nih.gov/30534962

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Sequence based data supports a single Nostoc strain in individual coralloid roots of cycads

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https://pubmed.ncbi.nlm.nih.gov/30534962

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ETE: a python Environment for Tree Exploration

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Host selection of symbiotic cyanobacteria in 31 species of the Australian cycad genus: Macrozamia (Zamiaceae).

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https://pubmed.ncbi.nlm.nih.gov/30534962

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Morphological and genetic diversity of symbiotic cyanobacteria from cycads.

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Identification and characterization of an indigoidine-like gene for a blue pigment biosynthesis in Streptomyces aureofaciens CCM 3239.

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CrfA, a small noncoding RNA regulator of adaptation to carbon starvation in Caulobacter crescentus

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Random Addition Concatenation Analysis: a novel approach to the exploration of phylogenomic signal reveals strong agreement between core and shell genomic partitions in the cyanobacteria

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Comparative analysis of cyanobacteria in the rhizosphere and as endosymbionts of cycads in drought-affected soils

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YcaO domains use ATP to activate amide backbones during peptide cyclodehydrations

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Genetic diversity of symbiotic cyanobacteria in Cycas revoluta (Cycadaceae)

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Production of the antimicrobial secondary metabolite indigoidine contributes to competitive surface colonization by the marine roseobacter Phaeobacter sp. strain Y4I

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An indigoidine biosynthetic gene cluster from Streptomyces chromofuscus ATCC 49982 contains an unusual IndB homologue

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Differential contributions of two SARP family regulatory genes to indigoidine biosynthesis in Streptomyces lavendulae FRI-5.

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DIVERSITY AND HOST SPECIFICITY OF AZOLLA CYANOBIONTS(1).

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Actinobacteria phylogenomics, selective isolation from an iron oligotrophic environment and siderophore functional characterization, unveil new desferrioxamine traits.

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Draft Genome Sequence of the Nitrogen-Fixing and Hormogonia-Inducing Cyanobacterium Nostoc cycadae Strain WK-1, Isolated from the Coralloid Roots of Cycas revoluta.

1 reference

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1 reference

https://pubmed.ncbi.nlm.nih.gov/30534962

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Genomic changes associated with the evolutionary transitions of Nostoc to a plant symbiont.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30534962

12 December 2020

based on heuristic

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Highly diverse endophytes in roots of Cycas bifida (Cycadaceae), an ancient but endangered gymnosperm

1 reference

https://pubmed.ncbi.nlm.nih.gov/30534962

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based on heuristic

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1 reference

https://pubmed.ncbi.nlm.nih.gov/30534962

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Identifiers

10.1093/GBE/EVY266

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13 April 2020

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Europe PubMed Central

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13 April 2020

1 reference

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13 April 2020

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