Revealing the mechanism for covalent inhibition of glycoside hydrolases by carbasugars at an atomic level (Q58786771)

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17 April 2020

title

Revealing the mechanism for covalent inhibition of glycoside hydrolases by carbasugars at an atomic level (English)

1 reference

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Author Correction: Revealing the mechanism for covalent inhibition of glycoside hydrolases by carbasugars at an atomic level

17 April 2020

main subject

general chemistry

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corrigendum / erratum

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author

Weiwu Ren

1

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17 April 2020

Katarzyna Świderek

10

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17 April 2020

Vicent Moliner

11

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17 April 2020

Tracey M. Gloster

13

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17 April 2020

Andrew J Bennet

14

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17 April 2020

5

Verena Oehler

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17 April 2020

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Saeideh Shamsi Kazem Abadi

4

object named as

Saeideh Shamsi Kazem Abadi

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17 April 2020

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9

Saswati Chakladar

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17 April 2020

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3

Marco Farren-Dai

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17 April 2020

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Robert Pengelly

2

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17 April 2020

Oluwafemi Akintola

6

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17 April 2020

Jason Draper

7

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17 April 2020

Michael Meanwell

8

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17 April 2020

Robert Britton

12

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17 April 2020

language of work or name

English

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publication date

13 August 2018

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17 April 2020

published in

Nature Communications

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17 April 2020

volume

9

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17 April 2020

page(s)

3243

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17 April 2020

issue

1

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Creative Commons Attribution 4.0 International

17 April 2020

copyright license

start time

13 August 2018

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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exact match

https://scigraph.springernature.com/pub.10.1038/s41467-018-05702-7

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cites work

Glycosyl Cations versus Allylic Cations in Spontaneous and Enzymatic Hydrolysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

New Class of Glycoside Hydrolase Mechanism-Based Covalent Inhibitors: Glycosylation Transition State Conformations.

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

Structural Snapshots for Mechanism-Based Inactivation of a Glycoside Hydrolase by Cyclopropyl Carbasugars

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

PROPKA3: Consistent Treatment of Internal and Surface Residues in Empirical pKa Predictions

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

The PDB_REDO server for macromolecular structure model optimization

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

Dissecting conformational contributions to glycosidase catalysis and inhibition

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

A critical survey of average distances between catalytic carboxyl groups in glycoside hydrolases.

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

The carbohydrate-active enzymes database (CAZy) in 2013

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

How good are my data and what is the resolution?

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

JSME: a free molecule editor in JavaScript

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

Conformational analyses of the reaction coordinate of glycosidases

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

REFMAC5 for the refinement of macromolecular crystal structures

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

Phasercrystallographic software

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

Mechanistic insights into glycosidase chemistry

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

Covalent inhibitors of glycosidases and their applications in biochemistry and biology

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

Density Functionals with Broad Applicability in Chemistry

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

A potent bicyclic inhibitor of a family 27 alpha-galactosidase.

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

Highly efficient ruthenium catalysts for the formation of tetrasubstituted olefins via ring-closing metathesis.

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

Puckering coordinates of monocyclic rings by triangular decomposition.

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

Biochemical analysis of Thermotoga maritima GH36 alpha-galactosidase (TmGalA) confirms the mechanistic commonality of clan GH-D glycoside hydrolases

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

Degrees of difficulty of water-consuming reactions in the absence of enzymes

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

Optimization of small molecule drugs binding to highly polar target sites: lessons from the discovery and development of neuraminidase inhibitors

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

Automatic atom type and bond type perception in molecular mechanical calculations

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

Scalable molecular dynamics with NAMD

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

Enantioselective organocatalytic alpha-fluorination of aldehydes

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

Coot: model-building tools for molecular graphics

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

The CCP4 suite: programs for protein crystallography

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

PRODRG: a tool for high-throughput crystallography of protein-ligand complexes

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

PDB2PQR: an automated pipeline for the setup of Poisson-Boltzmann electrostatics calculations

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

Review of acarbose therapeutic strategies in the long-term treatment and in the prevention of type 2 diabetes

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

A point-charge force field for molecular mechanics simulations of proteins based on condensed-phase quantum mechanical calculations

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

Recent developments of transition-state analogue glycosidase inhibitors of non-natural product origin

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

Synthesis and Biological Activity of Natural Aminocyclopentitol Glycosidase Inhibitors: Mannostatins, Trehazolin, Allosamidins, and Their Analogues.

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

Catalysis by hen egg-white lysozyme proceeds via a covalent intermediate

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

A new structural motif for the design of potent glucosidase inhibitors.

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

Synthesis and activity of a new generation of ruthenium-based olefin metathesis catalysts coordinated with 1,3-dimesityl-4,5-dihydroimidazol-2-ylidene ligands

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

Structure and synthesis of nojirimycin

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

Isolation and Identification of 2-Deoxy-2,3-dehydro-N-Acetylneuraminic Acid from the Urine of a Patient with Sialuria

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6089974

Castanospermine, A 1,6,7,8-tetrahydroxyoctahydroindolizine alkaloid, from seeds of Castanospermum australe

30 November 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41467-018-05702-7

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alpha-Glucosidase inhibitors. New complex oligosaccharides of microbial origin

1 reference

https://api.crossref.org/works/10.1038%2FS41467-018-05702-7

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Catalytic mechanism of enzymic glycosyl transfer

1 reference

https://api.crossref.org/works/10.1038%2FS41467-018-05702-7

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1 reference

https://api.crossref.org/works/10.1038%2FS41467-018-05702-7

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1 reference

https://api.crossref.org/works/10.1038%2FS41467-018-05702-7

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1 reference

https://api.crossref.org/works/10.1038%2FS41467-018-05702-7

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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Identifiers

DOI

10.1038/S41467-018-05702-7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30104598%20AND%20SRC:MED&resulttype=core&format=json

17 April 2020

0 references

1 reference

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17 April 2020

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