The Arabidopsis RRM domain protein EDM3 mediates race-specific disease resistance by controlling H3K9me2-dependent alternative polyadenylation of RPP7 immune receptor transcripts (Q58587905)

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scientific article published on 18 December 2018

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English	The Arabidopsis RRM domain protein EDM3 mediates race-specific disease resistance by controlling H3K9me2-dependent alternative polyadenylation of RPP7 immune receptor transcripts	scientific article published on 18 December 2018

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2 May 2020

The Arabidopsis RRM domain protein EDM3 mediates race-specific disease resistance by controlling H3K9me2-dependent alternative polyadenylation of RPP7 immune receptor transcripts (English)

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Yan Lai

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Jianqiang Wang

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Neerja Katiyar

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Tokuji Tsuchiya

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Karine Le Roch

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John M McDowell

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Eric Holub

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Thomas Eulgem

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Xueqing M Lu

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18 December 2018

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The Plant Journal

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2 May 2020

Four Arabidopsis RPP loci controlling resistance to the Noco2 isolate of Peronospora parasitica map to regions known to contain other RPP recognition specificities

1 reference

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12 December 2020

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Characterization of eds1, a mutation in Arabidopsis suppressing resistance to Peronospora parasitica specified by several different RPP genes

1 reference

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12 December 2020

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Intragenic recombination and diversifying selection contribute to the evolution of downy mildew resistance at the RPP8 locus of Arabidopsis.

1 reference

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12 December 2020

based on heuristic

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Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana

1 reference

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12 December 2020

based on heuristic

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Genetic and physical mapping of the RPP13 locus, in Arabidopsis, responsible for specific recognition of several Peronospora parasitica (downy mildew) isolates

1 reference

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12 December 2020

based on heuristic

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Downy mildew (Peronospora parasitica) resistance genes in Arabidopsis vary in functional requirements for NDR1, EDS1, NPR1 and salicylic acid accumulation.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

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Positional cloning in Arabidopsis. Why it feels good to have a genome initiative working for you.

1 reference

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12 December 2020

based on heuristic

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The arms race is ancient history in Arabidopsis, the wildflower

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

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Epigenetic variation in Arabidopsis disease resistance

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

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Arabidopsis RPP4 is a member of the RPP5 multigene family of TIR-NB-LRR genes and confers downy mildew resistance through multiple signalling components

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

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Arabidopsis SGT1b is required for defense signaling conferred by several downy mildew resistance genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

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A gain-of-function mutation in an Arabidopsis Toll Interleukin1 receptor-nucleotide binding site-leucine-rich repeat type R gene triggers defense responses and results in enhanced disease resistance

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

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Enhanced transcription of the Arabidopsis disease resistance genes RPW8.1 and RPW8.2 via a salicylic acid-dependent amplification circuit is required for hypersensitive cell death

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

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Arabidopsis RIN4 is a target of the type III virulence effector AvrRpt2 and modulates RPS2-mediated resistance.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genome-wide analysis of NBS-LRR-encoding genes in Arabidopsis.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Fitness costs of R-gene-mediated resistance in Arabidopsis thaliana.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

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A gateway cloning vector set for high-throughput functional analysis of genes in planta

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

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Cytosolic HSP90 associates with and modulates the Arabidopsis RPM1 disease resistance protein.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

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Plant immunity: the origami of receptor activation

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

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A novel cost of R gene resistance in the presence of disease.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Two TIR:NB:LRR genes are required to specify resistance to Peronospora parasitica isolate Cala2 in Arabidopsis.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

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RAR1 positively controls steady state levels of barley MLA resistance proteins and enables sufficient MLA6 accumulation for effective resistance.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

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Host-parasite coevolutionary conflict between Arabidopsis and downy mildew.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

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Antagonistic control of disease resistance protein stability in the plant immune system.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Gateway-compatible vectors for plant functional genomics and proteomics

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Host-microbe interactions: shaping the evolution of the plant immune response

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Two modes of pathogen recognition by plants

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

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Bacterial elicitation and evasion of plant innate immunity

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

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EDM2 is required for RPP7-dependent disease resistance in Arabidopsis and affects RPP7 transcript levels.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Hybrid necrosis: autoimmunity as a potential gene-flow barrier in plant species

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Gene splicing and mutagenesis by PCR-driven overlap extension

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The maximal size of protein to diffuse through the nuclear pore is larger than 60kDa

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Autoimmune response as a mechanism for a Dobzhansky-Muller-type incompatibility syndrome in plants

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A cluster of disease resistance genes in Arabidopsis is coordinately regulated by transcriptional activation and RNA silencing

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The TIR-NB-LRR gene SNC1 is regulated at the transcript level by multiple factors

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genome-wide association of histone H3 lysine nine methylation with CHG DNA methylation in Arabidopsis thaliana

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Fast and accurate short read alignment with Burrows-Wheeler transform

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genome-wide analysis of mono-, di- and trimethylation of histone H3 lysine 4 in Arabidopsis thaliana

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

BEDTools: a flexible suite of utilities for comparing genomic features

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Arabidopsis defense component EDM2 affects the floral transition in an FLC-dependent manner

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Arabidopsis downy mildew resistance gene RPP8 is induced by pathogens and salicylic acid and is regulated by W box cis elements

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Co-option of EDM2 to distinct regulatory modules in Arabidopsis thaliana development

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Autoimmunity in Arabidopsis acd11 is mediated by epigenetic regulation of an immune receptor

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

EMSY-like genes are required for full RPP7-mediated race-specific immunity and basal defense in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Stability of plant immune-receptor resistance proteins is controlled by SKP1-CULLIN1-F-box (SCF)-mediated protein degradation

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The cyclin L homolog MOS12 and the MOS4-associated complex are required for the proper splicing of plant resistance genes.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Adenosine Methylation in Arabidopsis mRNA is Associated with the 3' End and Reduced Levels Cause Developmental Defects

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transcriptional elongation and alternative splicing

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Alternative splicing: a pivotal step between eukaryotic transcription and translation

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mutations in EDM2 selectively affect silencing states of transposons and induce plant developmental plasticity

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Regulation of transcription of nucleotide-binding leucine-rich repeat-encoding genes SNC1 and RPP4 via H3K4 trimethylation

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mechanism for full-length RNA processing of Arabidopsis genes containing intragenic heterochromatin.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An alternative polyadenylation mechanism coopted to the Arabidopsis RPP7 gene through intronic retrotransposon domestication

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNA-binding protein regulates plant DNA methylation by controlling mRNA processing at the intronic heterochromatin-containing gene IBM1

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evolution and Conservation of Plant NLR Functions

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Arabidopsis EDM2 promotes IBM1 distal polyadenylation and regulates genome DNA methylation patterns

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Monoubiquitination of histone 2B at the disease resistance gene locus regulates its expression and impacts immune responses in Arabidopsis.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The long-term maintenance of a resistance polymorphism through diffuse interactions.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The PHD-finger module of the Arabidopsis thaliana defense regulator EDM2 can recognize triply modified histone H3 peptides

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Recent Progress in RXLR Effector Research

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

High-Resolution Mapping of RNA-Binding Regions in the Nuclear Proteome of Embryonic Stem Cells.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Intracellular innate immune surveillance devices in plants and animals.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Regulation of plant immune receptor accumulation through translational repression by a glycine-tyrosine-phenylalanine (GYF) domain protein.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A protein complex regulates RNA processing of intronic heterochromatin-containing genes in Arabidopsis.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transcript-level expression control of plant NLR genes.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30407670

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1111/TPJ.14148

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2 May 2020

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2 May 2020

1 reference

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2 May 2020

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