Functional Genomics of Drought Tolerance in Bioenergy Crops (Q58106929)

Hengfu Yin

1

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Jin-Gui Chen

Jin-Gui Chen

5

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Xiaohan Yang

Xiaohan Yang

12

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Gerald A Tuskan

11

Gerald A. Tuskan

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Stan D Wullschleger

9

Stan D. Wullschleger

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Timothy Tschaplinski

1 reference

ORCID Public Data File 2021

author name string

Chun Ju Chen

2

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Jun Yang

3

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David J. Weston

4

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Wellington Muchero

6

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Timothy J. Tschaplinski

8

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Zong-Ming (Max) Cheng

Critical Reviews in Plant Sciences

10

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publication date

7 March 2014

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published in

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volume

33

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issue

2-3

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page(s)

205-224

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cites work

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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Prevention of cellular ROS damage by isovitexin and related flavonoids

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Histone methylation in higher plants

21 January 2018

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Microarray-based analysis of stress-regulated microRNAs in Arabidopsis thaliana

21 January 2018

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AtPUB19, a U-box E3 ubiquitin ligase, negatively regulates abscisic acid and drought responses in Arabidopsis thaliana.

21 January 2018

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Stress-responsive microRNAs in Populus.

21 January 2018

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1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

SIZ1-mediated sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

The Arabidopsis SUMO E3 ligase SIZ1 controls phosphate deficiency responses.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

MORC family ATPases required for heterochromatin condensation and gene silencing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Integrating genome annotation and QTL position to identify candidate genes for productivity, architecture and water-use efficiency in Populus spp

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Mechanisms of salinity tolerance

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Arabidopsis OST1 protein kinase mediates the regulation of stomatal aperture by abscisic acid and acts upstream of reactive oxygen species production

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Protein farnesylation in plants: a greasy tale

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

A Raf-like MAPKKK gene DSM1 mediates drought resistance through reactive oxygen species scavenging in rice

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

The SINA E3 ligase OsDIS1 negatively regulates drought response in rice

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

A comparative study of salt tolerance parameters in 11 wild relatives of Arabidopsis thaliana

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

SUMO and SUMOylation in plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

OsPUB15, an E3 ubiquitin ligase, functions to reduce cellular oxidative stress during seedling establishment.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Apoplast proteome reveals that extracellular matrix contributes to multistress response in poplar

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

A proteomic study of the response to salinity and drought stress in an introgression strain of bread wheat

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Mapping the proteome of poplar and application to the discovery of drought-stress responsive proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Molecular and biochemical mechanisms associated with dormancy and drought tolerance in the desert legume Retama raetam

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Comparative transcriptome analysis of contrasting foxtail millet cultivars in response to short-term salinity stress

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

A histone acetyltransferase regulates active DNA demethylation in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Regulation and functional analysis of ZmDREB2A in response to drought and heat stresses in Zea mays L.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Cloning and functional analysis of a novel DREB1/CBF transcription factor involved in cold-responsive gene expression in Zea mays L.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Arabidopsis DREB2A-interacting proteins function as RING E3 ligases and negatively regulate plant drought stress-responsive gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Transcription factor families in Arabidopsis: major progress and outstanding issues for future research

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Monitoring expression profiles of rice genes under cold, drought, and high-salinity stresses and abscisic acid application using cDNA microarray and RNA gel-blot analyses

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

ABA perception and signalling.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Clone history shapes Populus drought responses

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Identification of novel and conserved Populus tomentosa microRNA as components of a response to water stress

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

WRKY transcription factors: key components in abscisic acid signalling.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Multivalent engagement of chromatin modifications by linked binding modules

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

The Arabidopsis C3H2C3-type RING E3 ubiquitin ligase AtAIRP1 is a positive regulator of an abscisic acid-dependent response to drought stress

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Arabidopsis Cys2/His2-type zinc-finger proteins function as transcription repressors under drought, cold, and high-salinity stress conditions

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Functional analysis of an Arabidopsis transcription factor, DREB2A, involved in drought-responsive gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

The ubiquitin-proteasome system regulates plant hormone signaling

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Sequence analysis of the genome of an oil-bearing tree, Jatropha curcas L

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

DNA methylation in plants: relationship to small RNAs and histone modifications, and functions in transposon inactivation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Regulatory metabolic networks in drought stress responses

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Complex regulation of ABA biosynthesis in plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Genetic association mapping identifies single nucleotide polymorphisms in genes that affect abscisic acid levels in maize floral tissues during drought

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

The Mg-chelatase H subunit of Arabidopsis antagonizes a group of WRKY transcription repressors to relieve ABA-responsive genes of inhibition

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

In silico targeted genome mining and comparative modelling reveals a putative protein similar to an Arabidopsis drought tolerance DNA binding transcription factor in Chromosome 6 of Sorghum bicolor genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

OsWRKY30 is activated by MAP kinases to confer drought tolerance in rice

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

The Mg-chelatase H subunit is an abscisic acid receptor.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Gene networks involved in drought stress response and tolerance

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Regulatory network of gene expression in the drought and cold stress responses.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Genetic, proteomic and metabolic analysis of the regulation of energy storage in rice seedlings in response to drought

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Two different novel cis-acting elements of erd1, a clpA homologous Arabidopsis gene function in induction by dehydration stress and dark-induced senescence

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

The Populus Genome Integrative Explorer (PopGenIE): a new resource for exploring the Populus genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Genome resequencing reveals multiscale geographic structure and extensive linkage disequilibrium in the forest tree Populus trichocarpa

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

The ubiquitin 26S proteasome proteolytic pathway

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Feedstocks for lignocellulosic biofuels

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Physiological mechanisms underlying OsNAC5-dependent tolerance of rice plants to abiotic stress

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Transcriptome changes in foxtail millet genotypes at high salinity: identification and characterization of a PHGPX gene specifically upregulated by NaCl in a salt-tolerant line

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Identification of AtHD2C as a novel regulator of abscisic acid responses in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

A novel WRKY transcription factor, SUSIBA2, participates in sugar signaling in barley by binding to the sugar-responsive elements of the iso1 promoter

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

MicroRNA expression analysis in the cellulosic biofuel crop switchgrass (Panicum virgatum) under abiotic stress.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

MAPK machinery in plants: recognition and response to different stresses through multiple signal transduction pathways

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

The abiotic stress-responsive NAC-type transcription factor OsNAC5 regulates stress-inducible genes and stress tolerance in rice

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Over-expression of JcDREB, a putative AP2/EREBP domain-containing transcription factor gene in woody biodiesel plant Jatropha curcas, enhances salt and freezing tolerance in transgenic Arabidopsis thaliana

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Computational identification and analysis of novel sugarcane microRNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Plant gene networks in osmotic stress response: from genes to regulatory networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Co-expression of the stress-inducible zinc finger homeodomain ZFHD1 and NAC transcription factors enhances expression of the ERD1 gene in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Isolation and functional analysis of Arabidopsis stress-inducible NAC transcription factors that bind to a drought-responsive cis-element in the early responsive to dehydration stress 1 promoter

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Regulation of transcription by MAP kinase cascades

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Calcium signaling network in plants: an overview

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

CYP707A3, a major ABA 8'-hydroxylase involved in dehydration and rehydration response in Arabidopsis thaliana

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Dynamic changes in genome-wide histone H3 lysine 4 methylation patterns in response to dehydration stress in Arabidopsis thaliana

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Water deficits affect caffeate O-methyltransferase, lignification, and related enzymes in maize leaves. A proteomic investigation

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Identification of drought-responsive microRNAs in Medicago truncatula by genome-wide high-throughput sequencing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Identifying the conserved network of cis-regulatory sites of a eukaryotic genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Drought-induced site-specific DNA methylation and its association with drought tolerance in rice (Oryza sativa L.).

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Structural and functional insights into core ABA signaling

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Poplar GTL1 is a Ca2+/calmodulin-binding transcription factor that functions in plant water use efficiency and drought tolerance

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Connecting genes, coexpression modules, and molecular signatures to environmental stress phenotypes in plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Genotype and time of day shape the Populus drought response

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Characterization of a novel class of plant homeodomain proteins that bind to the C4 phosphoenolpyruvate carboxylase gene of Flaveria trinervia

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Analysis of the Arabidopsis histidine kinase ATHK1 reveals a connection between vegetative osmotic stress sensing and seed maturation

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Soybean Trihelix transcription factors GmGT-2A and GmGT-2B improve plant tolerance to abiotic stresses in transgenic Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Mutation of a chitinase-like gene causes ectopic deposition of lignin, aberrant cell shapes, and overproduction of ethylene

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

ZmCBF3 overexpression improves tolerance to abiotic stress in transgenic rice (Oryza sativa) without yield penalty

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Drought inhibits photosynthetic capacity more in females than in males of Populus cathayana

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Functional requirement of plant farnesyltransferase during development in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Organization of cis-acting regulatory elements in osmotic- and cold-stress-responsive promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Transcriptional regulatory networks in cellular responses and tolerance to dehydration and cold stresses

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Genome-wide transcriptional response of Populus euphratica to long-term drought stress

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Antagonistic interaction between systemic acquired resistance and the abscisic acid-mediated abiotic stress response in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Cloning and characterization of a maize bZIP transcription factor, ZmbZIP72, confers drought and salt tolerance in transgenic Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

ABA-activated SnRK2 protein kinase is required for dehydration stress signaling in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

An ornithine δ-aminotransferase gene OsOAT confers drought and oxidative stress tolerance in rice

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

A proteomics approach for identifying osmotic-stress-related proteins in rice

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Overexpression of the soybean GmERF3 gene, an AP2/ERF type transcription factor for increased tolerances to salt, drought, and diseases in transgenic tobacco

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Overexpression of WXP1, a putative Medicago truncatula AP2 domain-containing transcription factor gene, increases cuticular wax accumulation and enhances drought tolerance in transgenic alfalfa (Medicago sativa).

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Overexpression analysis of plant transcription factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Identification of gene modules associated with drought response in rice by network-based analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Maize ABP9 enhances tolerance to multiple stresses in transgenic Arabidopsis by modulating ABA signaling and cellular levels of reactive oxygen species

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

SDIR1 is a RING finger E3 ligase that positively regulates stress-responsive abscisic acid signaling in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Genome-wide transcriptome analysis of two maize inbred lines under drought stress.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Overexpression of a NAC transcription factor enhances rice drought and salt tolerance

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

MYB58 and MYB63 are transcriptional activators of the lignin biosynthetic pathway during secondary cell wall formation in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Genome-wide identification and analysis of drought-responsive microRNAs in Oryza sativa

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Improvement of drought and salt tolerance in Arabidopsis and Lotus corniculatus by overexpression of a novel DREB transcription factor from Populus euphratica

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Soybean WRKY-type transcription factor genes, GmWRKY13, GmWRKY21, and GmWRKY54, confer differential tolerance to abiotic stresses in transgenic Arabidopsis plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Salt and drought stress signal transduction in plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417

Cloning of the Arabidopsis WIGGUM gene identifies a role for farnesylation in meristem development

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07352689.2014.870417