Two herpesviral noncoding PAN RNAs are functionally homologous but do not associate with common chromatin loci (Q58085175)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30383841%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

title

Two herpesviral noncoding PAN RNAs are functionally homologous but do not associate with common chromatin loci (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30383841%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

0 references

0 references

0 references

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30383841%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

Eric S Li

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30383841%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

Tenaya K Vallery

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30383841%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

Joan A. Steitz

series ordinal

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30383841%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

4

Therese A Yario

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30383841%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

language of work or name

English

0 references

publication date

1 November 2018

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30383841%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30383841%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

volume

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30383841%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

page(s)

e1007389

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30383841%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

issue

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30383841%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

1 May 2020

copyright license

start time

1 November 2018

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

RNA-protein interactions of stored 5S RNA with TFIIIA and ribosomal protein L5 during Xenopus oogenesis

1 reference

12 December 2020

Differential binding of oocyte-type and somatic-type 5S rRNA to TFIIIA and ribosomal protein L5 in Xenopus oocytes: specialization for storage versus mobilization.

1 reference

12 December 2020

Lytic growth of Kaposi's sarcoma-associated herpesvirus (human herpesvirus 8) in culture

1 reference

12 December 2020

Polyadenylylated nuclear RNA encoded by Kaposi sarcoma-associated herpesvirus

1 reference

12 December 2020

Characterization of an abundant, unique 1.7-kilobase bovine herpesvirus 4 (BHV-4) late RNA and mapping of a BHV-4 IE2 transactivator-binding site in its promoter-regulatory region

1 reference

12 December 2020

Characterization of ribonucleoprotein complexes containing an abundant polyadenylated nuclear RNA encoded by Kaposi's sarcoma-associated herpesvirus (human herpesvirus 8)

1 reference

12 December 2020

Herpes simplex virus 1 induces and blocks apoptosis at multiple steps during infection and protects cells from exogenous inducers in a cell-type-dependent manner

1 reference

12 December 2020

A mechanism regulating proteolysis of specific proteins during renal tubular cell growth

1 reference

12 December 2020

Transcriptional regulation of Kaposi's sarcoma-associated herpesvirus-encoded oncogene viral interferon regulatory factor by a novel transcriptional silencer, Tis.

1 reference

12 December 2020

Characterization of interactions between RTA and the promoter of polyadenylated nuclear RNA in Kaposi's sarcoma-associated herpesvirus/human herpesvirus 8.

1 reference

12 December 2020

Requirement of a 12-base-pair TATT-containing sequence and viral lytic DNA replication in activation of the Kaposi's sarcoma-associated herpesvirus K8.1 late promoter

1 reference

12 December 2020

Nuclear export of metazoan replication-dependent histone mRNAs is dependent on RNA length and is mediated by TAP.

1 reference

12 December 2020

The latency-associated nuclear antigen of rhesus monkey rhadinovirus inhibits viral replication through repression of Orf50/Rta transcriptional activation

1 reference

12 December 2020

A Kaposi's sarcoma virus RNA element that increases the nuclear abundance of intronless transcripts

1 reference

12 December 2020

Rapid evolution of noncoding RNAs: lack of conservation does not mean lack of function

1 reference

12 December 2020

Infection and persistence of rhesus monkey rhadinovirus in immortalized B-cell lines

1 reference

12 December 2020

Interactions between macromolecules and ions: The Hofmeister series

1 reference

12 December 2020

Identification of a Rapid Mammalian Deadenylation-Dependent Decay Pathway and Its Inhibition by a Viral RNA Element

1 reference

12 December 2020

Kcnq1ot1/Lit1 noncoding RNA mediates transcriptional silencing by targeting to the perinucleolar region

1 reference

12 December 2020

Model-based analysis of ChIP-Seq (MACS)

1 reference

12 December 2020

Kcnq1ot1 antisense noncoding RNA mediates lineage-specific transcriptional silencing through chromatin-level regulation

1 reference

12 December 2020

BEDTools: a flexible suite of utilities for comparing genomic features

1 reference

12 December 2020

Nuclear import of cytoplasmic poly(A) binding protein restricts gene expression via hyperadenylation and nuclear retention of mRNA.

1 reference

12 December 2020

Kaposi's sarcoma and its associated herpesvirus

1 reference

12 December 2020

Poly(A) Tail Recognition by a Viral RNA Element Through Assembly of a Triple Helix

1 reference

12 December 2020

Functional characterization of Kaposi's sarcoma-associated herpesvirus open reading frame K8 by bacterial artificial chromosome-based mutagenesis

1 reference

12 December 2020

Forkhead transcription factors: key players in health and disease

1 reference

12 December 2020

Kaposi's sarcoma-associated herpesvirus noncoding polyadenylated nuclear RNA interacts with virus- and host cell-encoded proteins and suppresses expression of genes involved in immune modulation

1 reference

12 December 2020

Genomic maps of long noncoding RNA occupancy reveal principles of RNA-chromatin interactions

1 reference

12 December 2020

A viral nuclear noncoding RNA binds re-localized poly(A) binding protein and is required for late KSHV gene expression

1 reference

12 December 2020

Stability of a long noncoding viral RNA depends on a 9-nt core element at the RNA 5' end to interact with viral ORF57 and cellular PABPC1.

1 reference

12 December 2020

The forkhead transcription factor FOXK2 promotes AP-1-mediated transcriptional regulation

1 reference

12 December 2020

Protein arginine methyltransferase 1-directed methylation of Kaposi sarcoma-associated herpesvirus latency-associated nuclear antigen

1 reference

12 December 2020

Conserved function of lincRNAs in vertebrate embryonic development despite rapid sequence evolution

1 reference

12 December 2020

KSHV PAN RNA associates with demethylases UTX and JMJD3 to activate lytic replication through a physical interaction with the virus genome

1 reference

12 December 2020

Conservation of a triple-helix-forming RNA stability element in noncoding and genomic RNAs of diverse viruses

1 reference

12 December 2020

An integrated encyclopedia of DNA elements in the human genome

1 reference

12 December 2020

Formation of triple-helical structures by the 3'-end sequences of MALAT1 and MENβ noncoding RNAs

1 reference

12 December 2020

CTCF regulates Kaposi's sarcoma-associated herpesvirus latency transcription by nucleosome displacement and RNA polymerase programming

1 reference

12 December 2020

Capture hybridization analysis of RNA targets (CHART).

1 reference

12 December 2020

Regulation of viral and cellular gene expression by Kaposi's sarcoma-associated herpesvirus polyadenylated nuclear RNA.

1 reference

12 December 2020

DNA virus replication compartments

1 reference

12 December 2020

A lytic viral long noncoding RNA modulates the function of a latent protein

1 reference

12 December 2020

KSHV 2.0: a comprehensive annotation of the Kaposi's sarcoma-associated herpesvirus genome using next-generation sequencing reveals novel genomic and functional features

1 reference

12 December 2020

Identification of properties of the Kaposi's sarcoma-associated herpesvirus latent origin of replication that are essential for the efficient establishment and maintenance of intact plasmids

1 reference

12 December 2020

Epstein-Barr virus late gene transcription depends on the assembly of a virus-specific preinitiation complex

1 reference

12 December 2020

Complete genome sequence of Pig-tailed macaque rhadinovirus 2 and its evolutionary relationship with rhesus macaque rhadinovirus and human herpesvirus 8/Kaposi's sarcoma-associated herpesvirus.

1 reference

12 December 2020

Exportin-5 mediates nuclear export of SRP RNA in vertebrates

1 reference

12 December 2020

EBV noncoding RNA binds nascent RNA to drive host PAX5 to viral DNA.

1 reference

12 December 2020

Association of Kaposi's Sarcoma-Associated Herpesvirus ORF31 with ORF34 and ORF24 Is Critical for Late Gene Expression

1 reference

12 December 2020

New insights into the expression and functions of the Kaposi's sarcoma-associated herpesvirus long noncoding PAN RNA.

1 reference

12 December 2020

Interaction between ORF24 and ORF34 in the Kaposi's Sarcoma-Associated Herpesvirus Late Gene Transcription Factor Complex Is Essential for Viral Late Gene Expression

1 reference

12 December 2020

Quantitative Analysis of the KSHV Transcriptome Following Primary Infection of Blood and Lymphatic Endothelial Cells

1 reference

12 December 2020

Kaposi's sarcoma-associated herpesvirus polyadenylated nuclear RNA: a structural scaffold for nuclear, cytoplasmic and viral proteins

1 reference

12 December 2020

Persistent KSHV Infection Increases EBV-Associated Tumor Formation In Vivo via Enhanced EBV Lytic Gene Expression.

1 reference

12 December 2020

Conditional mutagenesis in vivo reveals cell type- and infection stage-specific requirements for LANA in chronic MHV68 infection.

1 reference

12 December 2020

KSHV mRNA accumulation in nuclear foci is influenced by viral DNA replication and the viral noncoding PAN RNA.

1 reference

12 December 2020

10.1371/JOURNAL.PPAT.1007389

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30383841%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30383841%20AND%20SRC:MED&resulttype=core&format=json

1 May 2020

1 reference