How do insect nuclear ribosomal genes compare to protein-coding genes in phylogenetic utility and nucleotide substitution patterns? (Q57192091)

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Phylogenetic utility of the major opsin in bees (Hymenoptera: Apoidea): a reassessment.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Multiple sources of character information and the phylogeny of Hawaiian drosophilids

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Phylogenetic utility of different types of molecular data used to infer evolutionary relationships among stalk-eyed flies (Diopsidae).

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

The utility of the incongruence length difference test.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Robustness of ancestral state estimates: evolution of life history strategy in ichneumonoid parasitoids.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Evolution of the army ant syndrome: The origin and long-term evolutionary stasis of a complex of behavioral and reproductive adaptations

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Recent intron gain in elongation factor-1alpha of colletid bees (Hymenoptera: Colletidae).

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Phylogenetic relationships among the Nymphalidae (Lepidoptera) inferred from partial sequences of the wingless gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Patterns of mitochondrial versus nuclear DNA sequence divergence among nymphalid butterflies: the utility of wingless as a source of characters for phylogenetic inference

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Combined data, Bayesian phylogenetics, and the origin of the New Zealand cicada genera

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Multiple molecular data sets suggest independent origins of highly eusocial behavior in bees (Hymenoptera:Apinae).

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Molecular evolution of the wingless gene and its implications for the phylogenetic placement of the butterfly family Riodinidae (Lepidoptera: papilionoidea).

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

The current state of insect molecular systematics: a thriving Tower of Babel

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

A partitioned likelihood analysis of swallowtail butterfly phylogeny (Lepidoptera:Papilionidae).

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Cospeciation between bacterial endosymbionts (Buchnera) and a recent radiation of aphids (Uroleucon) and pitfalls of testing for phylogenetic congruence

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Exploring data interaction and nucleotide alignment in a multiple gene analysis of Ips (Coleoptera: Scolytinae).

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Phylogeny of the treehoppers (Insecta: Hemiptera: Membracidae): evidence from two nuclear genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Evolution of sociality in a primitively eusocial lineage of bees

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Phylogeny of eusocial Lasioglossum reveals multiple losses of eusociality within a primitively eusocial clade of bees (Hymenoptera: Halictidae).

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Elongation factor-1 alpha occurs as two copies in bees: implications for phylogenetic analysis of EF-1 alpha sequences in insects

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Phylogeny of the major lineages of Membracoidea (Insecta: Hemiptera: Cicadomorpha) based on 28S rDNA sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Increased congruence does not necessarily indicate increased phylogenetic accuracy--the behavior of the incongruence length difference test in mixed-model analyses.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

A new nuclear gene for insect phylogenetics: dopa decarboxylase is informative of relationships within Heliothinae (Lepidoptera: Noctuidae).

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Phylogenetic utility of the nuclear gene dopa decarboxylase in noctuoid moths (Insecta: Lepidoptera: noctuoidea).

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Two nuclear genes yield concordant relationships within Attacini (Lepidoptera: Saturniidae).

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

A nuclear gene for higher level phylogenetics: phosphoenolpyruvate carboxykinase tracks mesozoic-age divergences within Lepidoptera (Insecta).

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Arthropod phylogeny based on eight molecular loci and morphology

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

HOMOPLASY AND THE CHOICE AMONG CLADOGRAMS

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

The performance of several multiple-sequence alignment programs in relation to secondary-structure features for an rRNA sequence.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Ribosomal DNA: Molecular Evolution and Phylogenetic Inference

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

The Genome Sequence of the Malaria Mosquito Anopheles gambiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Potential applications and pitfalls of Bayesian inference of phylogeny

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

MRBAYES: Bayesian inference of phylogenetic trees

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Bayesian inference of phylogeny and its impact on evolutionary biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Evolution and phylogenetic utility of alignment gaps within intron sequences of three nuclear genes in bumble bees (Bombus).

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Phylogeny, historical biogeography, and character evolution in bumble bees (Bombus: Apidae) based on simultaneous analysis of three nuclear gene sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Aligned 18S and insect phylogeny.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Phylogeny of Trichoptera (caddisflies): characterization of signal and noise within multiple datasets

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Evolution of mitochondrial and ribosomal gene sequences in anophelinae (Diptera: Culicidae): implications for phylogeny reconstruction

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Toward understanding Anophelinae (Diptera, Culicidae) phylogeny: insights from nuclear single-copy genes and the weight of evidence

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Molecular phylogeny and historical biogeography of the large carpenter bees, genus Xylocopa (Hymenoptera: Apidae)

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

How do insect nuclear and mitochondrial gene substitution patterns differ? Insights from Bayesian analyses of combined datasets.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Integrating ambiguously aligned regions of DNA sequences in phylogenetic analyses without violating positional homology

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

The major opsin in bees (Insecta: Hymenoptera): A promising nuclear gene for higher level phylogenetics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Phylogenetic utility of elongation factor-1 alpha in noctuoidea (Insecta: Lepidoptera): the limits of synonymous substitution

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Evolution and phylogenetic utility of CAD (rudimentary) among Mesozoic-aged Eremoneuran Diptera (Insecta).

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Bayesian phylogenetic analysis of combined data

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Molecular systematics of aphids (Homoptera: Aphididae): new insights from the long-wavelength opsin gene.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Interaction of process partitions in phylogenetic analysis: an example from the swallowtail butterfly genus Papilio

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Evolution and phylogenetic utility of the period gene in Lepidoptera

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Phylogenetic analysis of arthropods using two nuclear protein-encoding genes supports a crustacean + hexapod clade

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Phylogenetic relationships within Diadasia, a group of specialist bees.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

On the evolution of Dopa decarboxylase (Ddc) and Drosophila systematics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

The ant subfamily Pseudomyrmecinae (Hymenoptera: Formicidae): phylogeny and evolution of big-eyed arboreal ants

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

The Phylogeny of the Extant Hexapod Orders

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Nuclear genes resolve mesozoic-aged divergences in the insect order Lepidoptera

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

A draft sequence for the genome of the domesticated silkworm (Bombyx mori).

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

On the best evolutionary rate for phylogenetic analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Higher-level phylogeny of the Therevidae (Diptera: insecta) based on 28S ribosomal and elongation factor-1 alpha gene sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

Estimation of the transition/transversion rate bias and species sampling.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X

The Palaeoptera Problem: Basal Pterygote Phylogeny Inferred from 18S and 28S rDNA Sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-3113.2005.00305.X