WeNMR: Structural Biology on the Grid (Q55120619)

Marc van Dijk

2

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Torsten Herrmann

Torsten Herrmann

13

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Antonio Rosato

Antonio Rosato

11

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Rolf Boelens

Rolf Boelens

8

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Harald Schwalbe

Harald Schwalbe

18

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Andrea Giachetti

Andrea Giachetti

9

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Peter Güntert

Peter Güntert

17

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Ivano Bertini

12

Ivano Bertini

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author name string

Tsjerk A. Wassenaar

1

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Nuno Loureiro-Ferreira

3

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Gijs van der Schot

4

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Sjoerd J. de Vries

5

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Christophe Schmitz

6

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Johan van der Zwan

7

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Lucio Ferella

10

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Hendrik R. A. Jonker

14

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Anurag Bagaria

15

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Victor Jaravine

16

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Wim F. Vranken

19

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Jurgen F. Doreleijers

20

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Gert Vriend

21

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Geerten W. Vuister

22

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Daniel Franke

23

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Alexey Kikhney

24

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Dmitri I. Svergun

25

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Rasmus H. Fogh

26

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John Ionides

27

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Ernest D. Laue

28

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Chris Spronk

29

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Simonas Jurkša

30

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Simone Badoer

32

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Stefano Dal Pra

33

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Mirco Mazzucato

34

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Eric Frizziero

35

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Alexandre M. J. J. Bonvin

Journal of Grid Computing

36

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publication date

30 November 2012

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published in

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volume

10

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issue

4

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page(s)

743-767

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copyright license

Creative Commons Attribution 2.0 Generic

start time

30 November 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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exact match

https://scigraph.springernature.com/pub.10.1007/s10723-012-9246-z

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1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

Resonance Absorption by Nuclear Magnetic Moments in a Solid

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

The eNMR platform for structural biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

Structural characterization of proteins and complexes using small-angle X-ray solution scattering.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

Structural basis for engagement by complement factor H of C3b on a self surface

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

Structural bases for the interaction of frataxin with the central components of iron-sulphur cluster assembly

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

A structure refinement protocol combining NMR residual dipolar couplings and small angle scattering restraints

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

Refined solution structure of the 82-kDa enzyme malate synthase G from joint NMR and synchrotron SAXS restraints

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

Refinement of multidomain protein structures by combination of solution small-angle X-ray scattering and NMR data

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

Taverna: a tool for building and running workflows of services

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

HADDOCK versus HADDOCK: new features and performance of HADDOCK2.0 on the CAPRI targets

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

HADDOCK: a protein-protein docking approach based on biochemical or biophysical information

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

The Xplor-NIH NMR molecular structure determination package

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

Torsion angle dynamics for NMR structure calculation with the new program DYANA

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

Consistent blind protein structure generation from NMR chemical shift data

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

De novo protein structure generation from incomplete chemical shift assignments.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

The Amber biomolecular simulation programs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

GROMACS: fast, flexible, and free

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

The CCPN data model for NMR spectroscopy: development of a software pipeline

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

Mars -- robust automatic backbone assignment of proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

TALOS+: a hybrid method for predicting protein backbone torsion angles from NMR chemical shifts

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

Hyperdimensional NMR spectroscopy with nonlinear sampling.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

Automated amino acid side-chain NMR assignment of proteins using (13)C- and (15)N-resolved 3D [ (1)H, (1)H]-NOESY.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

Automated sequence-specific protein NMR assignment using the memetic algorithm MATCH.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

Docking and scoring protein complexes: CAPRI 3rd Edition

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

Assessment of CAPRI predictions in rounds 3-5 shows progress in docking procedures

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

Data-driven docking: HADDOCK's adventures in CAPRI.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

21 January 2018

The Protein Data Bank

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

Protein structure prediction using Rosetta

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

Protein backbone chemical shifts predicted from searching a database for torsion angle and sequence homology

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

Protein backbone angle restraints from searching a database for chemical shift and sequence homology

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

The PSIPRED protein structure prediction server

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

A simple method to predict protein flexibility using secondary chemical shifts

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

A Grid-enabled web portal for NMR structure refinement with AMBER.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

GROMACS 3.0: a package for molecular simulation and trajectory analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

A biomolecular force field based on the free enthalpy of hydration and solvation: the GROMOS force-field parameter sets 53A5 and 53A6

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

An improved GROMOS96 force field for aliphatic hydrocarbons in the condensed phase

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

Force fields for protein simulations

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

CHARMM: A program for macromolecular energy, minimization, and dynamics calculations

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

The HADDOCK web server for data-driven biomolecular docking

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

CING: an integrated residue-based structure validation program suite

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

DAMMIF, a program for rapid ab-initio shape determination in small-angle scattering

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

Restoring low resolution structure of biological macromolecules from solution scattering using simulated annealing

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

Determination of domain structure of proteins from X-ray solution scattering

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

Conformational space of flexible biological macromolecules from average data

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

The GROMOS Biomolecular Simulation Program Package

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

Protein NMR structure determination with automated NOE-identification in the NOESY spectra using the new software ATNOS

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10723-012-9246-Z

10.1007/S10723-012-9246-Z

21 January 2018

Identifiers

DOI

0 references

DBLP publication ID

journals/grid/WassenaarDLSVSZBGFRBHJBJGSVDVVFKSFILSJVBPMFB12

1 reference

DBLP Dataset 2021-01-02