Stable DNA opening within open promoter complexes is mediated by the RNA polymerase beta'-jaw domain. (Q54480163)

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6 January 2020

title

Stable DNA opening within open promoter complexes is mediated by the RNA polymerase beta'-jaw domain (English)

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Sivaramesh Wigneshweraraj

6 January 2020

author

1

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6 January 2020

author name string

Patricia C Burrows

2

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6 January 2020

Konstantin Severinov

3

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6 January 2020

Martin Buck

4

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6 January 2020

language of work or name

English

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publication date

24 August 2005

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Journal of Biological Chemistry

6 January 2020

number of pages

9

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based on heuristic

inferred from page(s)

published in

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6 January 2020

volume

280

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6 January 2020

issue

43

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6 January 2020

page(s)

36176-36184

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Mechanochemical ATPases and transcriptional activation.

6 January 2020

cites work

1 reference

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The bacterial enhancer-dependent sigma(54) (sigma(N)) transcription factor

21 January 2018

1 reference

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Dissection of two hallmarks of the open promoter complex by mutation in an RNA polymerase core subunit

21 January 2018

1 reference

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Beta subunit residues 186-433 and 436-445 are commonly used by Esigma54 and Esigma70 RNA polymerase for open promoter complex formation.

21 January 2018

1 reference

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Structural basis of transcription initiation: an RNA polymerase holoenzyme-DNA complex

21 January 2018

1 reference

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A structural model of transcription elongation

21 January 2018

1 reference

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The role of RNA polymerase sigma subunit in promoter-independent initiation of transcription.

21 January 2018

1 reference

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Inhibition of Escherichia coli RNA polymerase by bacteriophage T7 gene 2 protein

21 January 2018

1 reference

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Regulated communication between the upstream face of RNA polymerase and the beta' subunit jaw domain

21 January 2018

1 reference

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Histidine-tagged RNA polymerase of Escherichia coli and transcription in solid phase.

21 January 2018

1 reference

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Enhancer-dependent transcription by bacterial RNA polymerase: the beta subunit downstream lobe is used by sigma 54 during open promoter complex formation.

21 January 2018

1 reference

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Communication between Esigma(54) , promoter DNA and the conserved threonine residue in the GAFTGA motif of the PspF sigma-dependent activator during transcription activation

21 January 2018

1 reference

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Binding of transcriptional activators to sigma 54 in the presence of the transition state analog ADP-aluminum fluoride: insights into activator mechanochemical action

21 January 2018

1 reference

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Mapping sigma 54-RNA polymerase interactions at the -24 consensus promoter element.

21 January 2018

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Reorganisation of an RNA polymerase-promoter DNA complex for DNA melting.

21 January 2018

1 reference

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Isomerization of a binary sigma-promoter DNA complex by transcription activators.

21 January 2018

1 reference

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Identification of close contacts between the sigma N (sigma 54) protein and promoter DNA in closed promoter complexes

21 January 2018

1 reference

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Structural insights into the activity of enhancer-binding proteins.

21 January 2018

1 reference

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Interaction of RNA polymerase with forked DNA: evidence for two kinetically significant intermediates on the pathway to the final complex

21 January 2018

1 reference

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Amino-terminal sequences of sigmaN (sigma54) inhibit RNA polymerase isomerization

21 January 2018

1 reference

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The bacterial enhancer-binding protein NTRC is a molecular machine: ATP hydrolysis is coupled to transcriptional activation

21 January 2018

1 reference

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Real-time characterization of intermediates in the pathway to open complex formation by Escherichia coli RNA polymerase at the T7A1 promoter

21 January 2018

1 reference

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Protein-nucleic acid interactions during open complex formation investigated by systematic alteration of the protein and DNA binding partners

21 January 2018

1 reference

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Systematic analysis of sigma54 N-terminal sequences identifies regions involved in positive and negative regulation of transcription

21 January 2018

1 reference

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Normal-mode analysis suggests protein flexibility modulation throughout RNA polymerase's functional cycle.

21 January 2018

1 reference

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Structural basis of transcription: an RNA polymerase II-TFIIB cocrystal at 4.5 Angstroms

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M506416200

Regulatory sequences in sigma 54 localise near the start of DNA melting.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M506416200

Conservation of sigma-core RNA polymerase proximity relationships between the enhancer-independent and enhancer-dependent sigma classes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M506416200

Structural organization of bacterial RNA polymerase holoenzyme and the RNA polymerase-promoter open complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M506416200

DNA melting within a binary sigma(54)-promoter DNA complex.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M506416200

Crystal structure of Thermus aquaticus core RNA polymerase at 3.3 A resolution.

21 January 2018

1 reference

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21 January 2018

Identifiers

DOI

10.1074/JBC.M506416200

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16123036%20AND%20SRC:MED&resulttype=core&format=json

6 January 2020

1 reference