Genetic diversity analysis of elite European maize (Zea mays L.) inbred lines using AFLP, SSR, and SNP markers reveals ascertainment bias for a subset of SNPs. (Q53105295)

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scientific article published on 4 September 2012

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English	Genetic diversity analysis of elite European maize (Zea mays L.) inbred lines using AFLP, SSR, and SNP markers reveals ascertainment bias for a subset of SNPs.	scientific article published on 4 September 2012

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scholarly article

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Europe PubMed Central

PubMed publication ID

11 May 2018

http://europepmc.org/abstract/MED/22945268

Genetic diversity analysis of elite European maize (Zea mays L.) inbred lines using AFLP, SSR, and SNP markers reveals ascertainment bias for a subset of SNPs. (English)

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Europe PubMed Central

PubMed publication ID

11 May 2018

http://europepmc.org/abstract/MED/22945268

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genetic diversity

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Albrecht E. Melchinger

3

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Europe PubMed Central

PubMed publication ID

11 May 2018

http://europepmc.org/abstract/MED/22945268

Tobias A Schrag

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Tobias A Schrag

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Elisabetta Frascaroli

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Elisabetta Frascaroli

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publication date

4 September 2012

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Europe PubMed Central

PubMed publication ID

11 May 2018

http://europepmc.org/abstract/MED/22945268

Theoretical and Applied Genetics

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Europe PubMed Central

PubMed publication ID

11 May 2018

http://europepmc.org/abstract/MED/22945268

126

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Europe PubMed Central

PubMed publication ID

11 May 2018

http://europepmc.org/abstract/MED/22945268

1

1 reference

Europe PubMed Central

PubMed publication ID

11 May 2018

http://europepmc.org/abstract/MED/22945268

133-141

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Europe PubMed Central

PubMed publication ID

11 May 2018

http://europepmc.org/abstract/MED/22945268

https://scigraph.springernature.com/pub.10.1007/s00122-012-1968-6

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Ascertainment biases in SNP chips affect measures of population divergence

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Ascertainment bias in studies of human genome-wide polymorphism.

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A robust, simple genotyping-by-sequencing (GBS) approach for high diversity species

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Trends in genetic variance components during 30 years of hybrid maize breeding at the University of Hohenheim

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A first-generation haplotype map of maize

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https://api.crossref.org/works/10.1007%2FS00122-012-1968-6

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Homoplasy corrected estimation of genetic similarity from AFLP bands, and the effect of the number of bands on the precision of estimation

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Empirical comparison of Simple Sequence Repeats and single nucleotide polymorphisms in assessment of maize diversity and relatedness

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Genomic selection in plant breeding: from theory to practice

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PowerMarker: an integrated analysis environment for genetic marker analysis

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Molecular characterization of global maize breeding germplasm based on genome-wide single nucleotide polymorphisms

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Effect of population structure corrections on the results of association mapping tests in complex maize diversity panels

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Effects of ascertainment bias and marker number on estimations of barley diversity from high-throughput SNP genotype data

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Correcting for ascertainment biases when analyzing SNP data: applications to the estimation of linkage disequilibrium

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pegas: an R package for population genetics with an integrated-modular approach

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Applications of single nucleotide polymorphisms in crop genetics

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Correcting estimators of theta and Tajima's D for ascertainment biases caused by the single-nucleotide polymorphism discovery process

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Design of a high density SNP genotyping assay in the pig using SNPs identified and characterized by next generation sequencing technology

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21 January 2018

The evolution of molecular markers--just a matter of fashion?

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Prediction of hybrid performance in maize using molecular markers and joint analyses of hybrids and parental inbreds

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https://api.crossref.org/works/10.1007%2FS00122-012-1968-6

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Development and mapping of SSR markers for maize.

1 reference

https://api.crossref.org/works/10.1007%2FS00122-012-1968-6

21 January 2018

Data from amplified fragment length polymorphism (AFLP) markers show indication of size homoplasy and of a relationship between degree of homoplasy and fragment size

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https://api.crossref.org/works/10.1007%2FS00122-012-1968-6

21 January 2018

AFLP: a new technique for DNA fingerprinting

1 reference

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21 January 2018

The effects of artificial selection on the maize genome

1 reference

https://api.crossref.org/works/10.1007%2FS00122-012-1968-6

21 January 2018

Panzea: a database and resource for molecular and functional diversity in the maize genome

1 reference

https://api.crossref.org/works/10.1007%2FS00122-012-1968-6

21 January 2018

The detection of disease clustering and a generalized regression approach

1 reference

https://pubmed.ncbi.nlm.nih.gov/22945268

12 December 2020

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A large maize (Zea mays L.) SNP genotyping array: development and germplasm genotyping, and genetic mapping to compare with the B73 reference genome

1 reference

https://pubmed.ncbi.nlm.nih.gov/22945268

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A comparison of simple sequence repeat and single nucleotide polymorphism marker technologies for the genotypic analysis of maize (Zea mays L.).

1 reference

https://pubmed.ncbi.nlm.nih.gov/22945268

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Genomic prediction of hybrid performance in maize with models incorporating dominance and population specific marker effects

1 reference

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The effect of population structure on the relationship between heterosis and heterozygosity at marker loci

1 reference

https://pubmed.ncbi.nlm.nih.gov/22945268

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Islands and streams: clusters and gene flow in wild barley populations from the Levant.

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Sequence divergence of rice microsatellites in Oryza and other plant species

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Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data

1 reference

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Single-nucleotide polymorphism (SNP) discovery and applications of SNP genotyping in nonmodel organisms

1 reference

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ESTIMATING F-STATISTICS FOR THE ANALYSIS OF POPULATION STRUCTURE.

1 reference

https://pubmed.ncbi.nlm.nih.gov/22945268

12 December 2020

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Prediction of single-cross hybrid performance for grain yield and grain dry matter content in maize using AFLP markers associated with QTL

1 reference

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12 December 2020

based on heuristic

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Identifiers

10.1007/S00122-012-1968-6

1 reference

Europe PubMed Central

PubMed publication ID

11 May 2018

http://europepmc.org/abstract/MED/22945268

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

11 May 2018

http://europepmc.org/abstract/MED/22945268

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