Excess counterion binding and ionic stability of kinked and branched DNA. (Q52235104)

27 April 2018

title

Excess counterion binding and ionic stability of kinked and branched DNA. (English)

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27 April 2018

author name string

Fenley MO

1

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27 April 2018

Manning GS

2

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27 April 2018

Marky NL

3

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27 April 2018

Olson WK

4

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27 April 2018

publication date

1 August 1998

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27 April 2018

published in

Biophysical Chemistry

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27 April 2018

volume

74

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27 April 2018

issue

2

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27 April 2018

page(s)

135-152

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27 April 2018

SRY, like HMG1, recognizes sharp angles in DNA

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Protein HU binds specifically to kinked DNA

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Structural basis for DNA bending by the architectural transcription factor LEF-1

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The structure of branched DNA species

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Detection of localized DNA flexibility

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Three-way and four-way junctions in DNA: a conformational viewpoint

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Hammering away at RNA global structure.

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Classification of nucleic acid junctions

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7 January 2021

DNA branched junctions

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7 January 2021

Genetic recombination: four-way DNA junctions and their resolution

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7 January 2021

Molecular and genetic recombination of bacteriophage T4

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The global conformation of an active hammerhead RNA during the process of self-cleavage

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Conformation of the central, three-helix junction of the 5 S ribosomal RNA of Sulfolobus acidocaldarius

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The global folding of four-way helical junctions in RNA, including that in U1 snRNA

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7 January 2021

Intercalation, DNA kinking, and the control of transcription.

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7 January 2021

Excess counterion accumulation around branched nucleic acids

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7 January 2021

The structure of the four-way junction in DNA.

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7 January 2021

The solution structure of the four-way DNA junction at low-salt conditions: a fluorescence resonance energy transfer analysis

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7 January 2021

Approach to the limit of counterion condensation

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7 January 2021

NMR studies and conformational analysis of a DNA four-way junction formed in a linear synthetic oligonucleotide

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7 January 2021

Two-dimensional 1H NMR studies of immobile Holliday junctions: nonlabile proton assignments and identification of crossover isomers

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7 January 2021

Refinement of the solution structure of a branched DNA three-way junction

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7 January 2021

Local DNA stretching mimics the distortion caused by the TATA box-binding protein

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7 January 2021

Organization of DNA in chromatin

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7 January 2021

Asymmetric structure of a three-arm DNA junction

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7 January 2021

Effect of sequence on the structure of three-arm DNA junctions

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7 January 2021

Global structure of three-way DNA junctions with and without additional unpaired bases: a fluorescence resonance energy transfer analysis

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7 January 2021

Structure of three-way DNA junctions. 1. Non-planar DNA geometry

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7 January 2021

Cruciform-resolvase interactions in supercoiled DNA.

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7 January 2021

Geometry of a branched DNA structure in solution

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7 January 2021

The molecular theory of polyelectrolyte solutions with applications to the electrostatic properties of polynucleotides

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7 January 2021

Thermodynamic analysis of ion effects on the binding and conformational equilibria of proteins and nucleic acids: the roles of ion association or release, screening, and ion effects on water activity

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7 January 2021

Stability and structure of three-way DNA junctions containing unpaired nucleotides

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7 January 2021

Structures of bulged three-way DNA junctions

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7 January 2021

Two inequivalent folding isomers of the three-way DNA junction with unpaired bases: sequence-dependence of the folded conformation

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7 January 2021

Effect of additional unpaired bases on the stability of three-way DNA junctions studied by fluorescence techniques

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7 January 2021

Ionic interactions and the global conformations of the hammerhead ribozyme

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7 January 2021

Modeling DNA in aqueous solutions: theoretical and computer simulation studies on the ion atmosphere of DNA.

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7 January 2021

Calculations of nucleic acid conformations

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7 January 2021

The effect of a variable dielectric coefficient and finite ion size on Poisson-Boltzmann calculations of DNA-electrolyte systems

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7 January 2021

Salt effects on protein-DNA interactions. The lambda cI repressor and EcoRI endonuclease.

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7 January 2021

Conformational distributions of a four-way DNA junction revealed by time-resolved fluorescence resonance energy transfer.

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7 January 2021

Conformational flexibility of three-way DNA junctions containing unpaired nucleotides.

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7 January 2021

Sequence dependence and direct measurement of crossover isomer distribution in model Holliday junctions using NMR spectroscopy

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7 January 2021

Salt-induced co-operative conformational change of a synthetic DNA: Equilibrium and kinetic studies with poly(dG-dC)

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7 January 2021

Strained DNA is kinked by low concentrations of Zn2+

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7 January 2021

10.1016/S0301-4622(98)00171-9

Identifiers

DOI

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27 April 2018

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27 April 2018