Towards the chemometric dissection of peptide--HLA-A*0201 binding affinity: comparison of local and global QSAR models. (Q51967888)

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4 January 2020

title

Towards the chemometric dissection of peptide--HLA-A*0201 binding affinity: comparison of local and global QSAR models (English)

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4 January 2020

1

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4 January 2020

Persephone Borrow

series ordinal

3

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4 January 2020

author name string

Valerie Walshe

series ordinal

2

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4 January 2020

Darren R Flower

series ordinal

4

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publication date

1 March 2005

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Journal of Computer - Aided Molecular Design

4 January 2020

published in

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volume

19

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issue

3

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4 January 2020

page(s)

203-212

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Coupling in silico and in vitro analysis of peptide-MHC binding: a bioinformatic approach enabling prediction of superbinding peptides and anchorless epitopes.

4 January 2020

cites work

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Greater CD8+ TCR heterogeneity and functional flexibility in HIV-2 compared to HIV-1 infection

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Breast and ovarian cancer-specific cytotoxic T lymphocytes recognize the same HER2/neu-derived peptide

21 January 2018

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Additive method for the prediction of protein-peptide binding affinity. Application to the MHC class I molecule HLA-A*0201.

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World distribution of HLA alleles and implications for disease

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Induction of tumor-reactive CTL from peripheral blood and tumor-infiltrating lymphocytes of melanoma patients by in vitro stimulation with an immunodominant peptide of the human melanoma antigen MART-1.

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Minimum analogue peptide sets (MAPS) for quantitative structure-activity relationships

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The relationship between class I binding affinity and immunogenicity of potential cytotoxic T cell epitopes

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From peptides to peptidomimetics: design of nonpeptide ligands for major histocompatibility proteins

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New chemical descriptors relevant for the design of biologically active peptides. A multivariate characterization of 87 amino acids

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12 December 2020

Refined structure of the human histocompatibility antigen HLA-A2 at 2.6 A resolution

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Identification of new HER2/neu-derived peptide epitopes that can elicit specific CTL against autologous and allogeneic carcinomas and melanomas

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X-ray structure of calcineurin inhibited by the immunophilin-immunosuppressant FKBP12-FK506 complex

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Assessment of major histocompatibility complex class I interaction with Epstein-Barr virus and human immunodeficiency virus peptides by elevation of membrane H-2 and HLA in peptide loading-deficient cells

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Nomenclature for factors of the HLA system, 2000.

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The three-dimensional structure of peptide-MHC complexes

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The antigenic identity of peptide-MHC complexes: A comparison of the conformations of five viral peptides presented by HLA-A2

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Naturally processed peptides longer than nine amino acid residues bind to the class I MHC molecule HLA-A2.1 with high affinity and in different conformations

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Prominent role of secondary anchor residues in peptide binding to HLA-A2.1 molecules

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The prediction of bradykinin potentiating potency of pentapeptides. An example of a peptide quantitative structure-activity relationship

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Modes of presentation of chemical neoantigens to the immune system

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Allele-specific motifs revealed by sequencing of self-peptides eluted from MHC molecules

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10.1007/S10822-005-3993-X

Identifiers

DOI

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journals/jcamd/DoytchinovaWBF05

4 January 2020

DBLP publication ID

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DBLP Dataset 2021-01-02

28 January 2021

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