HaploGrep: a fast and reliable algorithm for automatic classification of mitochondrial DNA haplogroups. (Q51646047)

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15 February 2020

title

HaploGrep: a fast and reliable algorithm for automatic classification of mitochondrial DNA haplogroups (English)

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15 February 2020

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7

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15 February 2020

Hansi Weißensteiner

4

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15 February 2020

author name string

Anita Kloss-Brandstätter

1

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15 February 2020

Dominic Pacher

2

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15 February 2020

Sebastian Schönherr

3

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15 February 2020

Robert Binna

5

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15 February 2020

Günther Specht

6

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publication date

16 November 2010

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15 February 2020

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15 February 2020

volume

32

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15 February 2020

issue

1

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15 February 2020

page(s)

25-32

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Median-joining networks for inferring intraspecific phylogenies

15 February 2020

cites work

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

The phylogeny of the four pan-American MtDNA haplogroups: implications for evolutionary and disease studies

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Reanalysis and revision of the Cambridge reference sequence for human mitochondrial DNA

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Low "penetrance" of phylogenetic knowledge in mitochondrial disease studies.

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Translating DNA data tables into quasi-median networks for parsimony analysis and error detection

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Detecting errors in mtDNA data by phylogenetic analysis

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

‘Distorted’ mitochondrial DNA sequences in schizophrenic patients

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

The fingerprint of phantom mutations in mitochondrial DNA data

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Contamination and sample mix-up can best explain some patterns of mtDNA instabilities in buccal cells and oral squamous cell carcinoma

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Problems in FBI mtDNA database.

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Median network analysis of defectively sequenced entire mitochondrial genomes from early and contemporary disease studies

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

High penetrance of sequencing errors and interpretative shortcomings in mtDNA sequence analysis of LHON patients.

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

The matrilineal ancestry of Ashkenazi Jewry: portrait of a recent founder event

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

The dawn of human matrilineal diversity

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Epidemiology. DNA identifications after the 9/11 World Trade Center attack

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Principal-component analysis for assessment of population stratification in mitochondrial medical genetics

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Migration rates and genetic structure of two Hungarian ethnic groups in Transylvania, Romania

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Application of a quasi-median network analysis for the visualization of character conflicts to a population sample of mitochondrial DNA control region sequences from southern Germany (Ulm)

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Generating population data for the EMPOP database - an overview of the mtDNA sequencing and data evaluation processes considering 273 Austrian control region sequences as example

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Mitochondrial DNA control region sequences from Nairobi (Kenya): inferring phylogenetic parameters for the establishment of a forensic database

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Dissection of mitochondrial superhaplogroup H using coding region SNPs

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Phantom mutation hotspots in human mitochondrial DNA.

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Timing and deciphering mitochondrial DNA macro-haplogroup R0 variability in Central Europe and Middle East

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Normal levels of wild-type mitochondrial DNA maintain cytochrome c oxidase activity for two pathogenic mitochondrial DNA mutations but not for m.3243A-->G.

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Pathogenic mitochondrial DNA mutations are common in the general population

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

The mtDNA composition of Uzbekistan: a microcosm of Central Asian patterns

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Mitochondrial DNA sequence heteroplasmy in the Grand Duke of Russia Georgij Romanov establishes the authenticity of the remains of Tsar Nicholas II

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Ethiopian mitochondrial DNA heritage: tracking gene flow across and around the gate of tears

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Distilling artificial recombinants from large sets of complete mtDNA genomes

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

mtDNAmanager: a Web-based tool for the management and quality analysis of mitochondrial DNA control-region sequences

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Mitochondrial DNA control region sequences in Koreans: identification of useful variable sites and phylogenetic analysis for mtDNA data quality control.

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

MitoVariome: a variome database of human mitochondrial DNA.

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Single, Rapid Coastal Settlement of Asia Revealed by Analysis of Complete Mitochondrial Genomes

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Mitochondrial haplogroup U5b3: a distant echo of the epipaleolithic in Italy and the legacy of the early Sardinians

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Phylogeny of mitochondrial DNA macrohaplogroup N in India, based on complete sequencing: implications for the peopling of South Asia

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

The diversity present in 5140 human mitochondrial genomes

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Strong maternal Khoisan contribution to the South African coloured population: a case of gender-biased admixture

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

A practical guide to mitochondrial DNA error prevention in clinical, forensic, and population genetics

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

A critical reassessment of the role of mitochondria in tumorigenesis

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

eCOMPAGT -- efficient combination and management of phenotypes and genotypes for genetic epidemiology

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

The archaeogenetics of Europe

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Correcting for purifying selection: an improved human mitochondrial molecular clock

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

A signal, from human mtDNA, of postglacial recolonization in Europe

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Molecular epidemiology of childhood mitochondrial encephalomyopathies in a Finnish population: sequence analysis of entire mtDNA of 17 children reveals heteroplasmic mutations in tRNAArg, tRNAGlu, and tRNALeu(UUR) genes

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Revision of the mtDNA tree and corresponding haplogroup nomenclature

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

mtDNA tree Build 17 (18 Feb 2016)

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

eCOMPAGT integrates mtDNA: import, validation and export of mitochondrial DNA profiles for population genetics, tumour dynamics and genotype-phenotype association studies

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

To trust or not to trust an idiosyncratic mitochondrial data set.

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Forensic and phylogeographic characterization of mtDNA lineages from northern Thailand (Chiang Mai).

1 reference

https://api.crossref.org/works/10.1002%2FHUMU.21382

7 January 2021

Identifiers

DOI

10.1002/HUMU.21382

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20960467%20AND%20SRC:MED&resulttype=core&format=json

15 February 2020

1 reference

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