Structural analysis of activated SgrAI-DNA oligomers using ion mobility mass spectrometry. (Q50931690)

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2 March 2020

title

Structural analysis of activated SgrAI-DNA oligomers using ion mobility mass spectrometry (English)

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2 March 2020

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Xin Ma

1

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2 March 2020

Mowei Zhou

3

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2 March 2020

Nancy C Horton

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author name string

Santosh Shah

2

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2 March 2020

Chad K Park

4

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language of work or name

English

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publication date

17 June 2013

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2 March 2020

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volume

52

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issue

25

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page(s)

4373-4381

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Electrospray ionization mass spectrometry: a promising new technique in the study of protein/DNA noncovalent complexes

2 March 2020

cites work

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Self-generated DNA termini relax the specificity of SgrAI restriction endonuclease

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Subunit assembly for DNA cleavage by restriction endonuclease SgrAI.

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Kinetic analysis of the coordinated interaction of SgrAI restriction endonuclease with different DNA targets

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Applications of a travelling wave-based radio-frequency-only stacked ring ion guide

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Ca2+ binding in the active site of HincII: implications for the catalytic mechanism

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Long-range communications between DNA sites by the dimeric restriction endonuclease SgrAI.

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Estimates of protein surface areas in solution by electrospray ionization mass spectrometry

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Evidence for macromolecular protein rings in the absence of bulk water.

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A view of consecutive binding events from structures of tetrameric endonuclease SfiI bound to DNA.

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Alteration of sequence specificity of the type II restriction endonuclease HincII through an indirect readout mechanism

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Determining the stoichiometry and interactions of macromolecular assemblies from mass spectrometry

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Protein complexes in the gas phase: technology for structural genomics and proteomics

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Ion mobility–mass spectrometry analysis of large protein complexes

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The structure of SgrAI bound to DNA; recognition of an 8 base pair target

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Fundamentals of traveling wave ion mobility spectrometry

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Chaperonin complexes monitored by ion mobility mass spectrometry

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Interactions of DNA with biofilm-derived membrane vesicles

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Integrating ion mobility mass spectrometry with molecular modelling to determine the architecture of multiprotein complexes

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How useful is ion mobility mass spectrometry for structural biology? The relationship between protein crystal structures and their collision cross sections in the gas phase

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Activation of DNA cleavage by oligomerization of DNA-bound SgrAI

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Determining the topology of virus assembly intermediates using ion mobility spectrometry-mass spectrometry

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Collision cross sections of proteins and their complexes: a calibration framework and database for gas-phase structural biology

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12 December 2020

Domain Swapping in Allosteric Modulation of DNA Specificity

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12 December 2020

New clues in the allosteric activation of DNA cleavage bySgrAI: structures ofSgrAI bound to cleaved primary-site DNA and uncleaved secondary-site DNA

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12 December 2020

Interrogating viral capsid assembly with ion mobility-mass spectrometry

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A Study of Ion-Neutral Collision Cross Section Values for Low Charge States of Peptides, Proteins, and Peptide/Protein Complexes.

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Enhancements in travelling wave ion mobility resolution

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SgrAI, a novel class-II restriction endonuclease from Streptomyces griseus recognizing the octanucleotide sequence 5'-CR/CCGGYG-3' [corrected]

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Mass spectrometry: come of age for structural and dynamical biology.

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Charge-State Dependent Compaction and Dissociation of Protein Complexes: Insights from Ion Mobility and Molecular Dynamics

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Protein Subunits Released by Surface Collisions of Noncovalent Complexes: Nativelike Compact Structures Revealed by Ion Mobility Mass Spectrometry

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Why do GroEL ions exhibit two gas phase conformers?

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DNA restriction and modification mechanisms in bacteria

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12 December 2020

The effect of sequence specific DNA methylation on restriction endonuclease cleavage

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Bacteriophage survival: multiple mechanisms for avoiding the deoxyribonucleic acid restriction systems of their hosts

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12 December 2020

Specific DNA recognition by EcoRV restriction endonuclease induced by calcium ions.

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12 December 2020

Biology of DNA restriction

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12 December 2020

Crystal structure of Citrobacter freundii restriction endonuclease Cfr10I at 2.15 A resolution

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12 December 2020

Specific binding by EcoRV endonuclease to its DNA recognition site GATATC.

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12 December 2020

Catalytic and DNA binding properties of PvuII restriction endonuclease mutants

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12 December 2020

Studying noncovalent protein complexes by electrospray ionization mass spectrometry

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12 December 2020

DNA excision by the Sfi I restriction endonuclease

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12 December 2020

Identifiers

DOI

10.1021/BI3013214

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2 March 2020

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