DDM1 binds Arabidopsis methyl-CpG binding domain proteins and affects their subnuclear localization. (Q50773093)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15805479%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

title

DDM1 binds Arabidopsis methyl-CpG binding domain proteins and affects their subnuclear localization (English)

1 reference

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perinucleolar chromocenter

10 January 2020

main subject

1 reference

Gene Ontology release 2020-05-02

7

1 reference

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10 January 2020

Assaf Zemach

1

1 reference

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10 January 2020

author name string

Yan Li

2

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10 January 2020

Bess Wayburn

3

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10 January 2020

Hagit Ben-Meir

4

1 reference

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10 January 2020

Vladimir Kiss

5

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10 January 2020

Yigal Avivi

6

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10 January 2020

Steven E Jacobsen

8

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10 January 2020

Gideon Grafi

9

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10 January 2020

publication date

1 April 2005

1 reference

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10 January 2020

1 reference

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10 January 2020

volume

17

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10 January 2020

issue

5

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10 January 2020

page(s)

1549-1558

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Brahma links the SWI/SNF chromatin-remodeling complex with MeCP2-dependent transcriptional silencing

10 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

Reorganization of specific chromosomal domains and activation of silent genes in plant cells acquiring pluripotentiality.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

Dimethylation of histone H3 lysine 9 is a critical mark for DNA methylation and gene silencing in Arabidopsis thaliana.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

Arabidopsis MBD proteins show different binding specificities and nuclear localization

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

A concerted DNA methylation/histone methylation switch regulates rRNA gene dosage control and nucleolar dominance

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

Association of Lsh, a regulator of DNA methylation, with pericentromeric heterochromatin is dependent on intact heterochromatin

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

Methylated DNA-Binding Proteins from Arabidopsis

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

Ten members of the Arabidopsis gene family encoding methyl-CpG-binding domain proteins are transcriptionally active and at least one, AtMBD11, is crucial for normal development

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

Erasure of CpG methylation in Arabidopsis alters patterns of histone H3 methylation in heterochromatin

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

Characterization of Arabidopsis thaliana methyl-CpG-binding domain (MBD) proteins

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

An epigenetic road map for histone lysine methylation

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

Methyl-CpG binding domain 1 (MBD1) interacts with the Suv39h1-HP1 heterochromatic complex for DNA methylation-based transcriptional repression

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

The methyl-CpG binding domain and the evolving role of DNA methylation in animals

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

Trimethylated lysine 9 of histone H3 is a mark for DNA methylation in Neurospora crassa

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

Arabidopsis MET1 cytosine methyltransferase mutants

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

Histone and chromatin cross-talk

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

Histone modifications in Arabidopsis- high methylation of H3 lysine 9 is dispensable for constitutive heterochromatin

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

An Arabidopsis SET domain protein required for maintenance but not establishment of DNA methylation

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

DNA methylation controls histone H3 lysine 9 methylation and heterochromatin assembly in Arabidopsis.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

The methyl-CpG-binding protein MeCP2 links DNA methylation to histone methylation

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

Interphase chromosomes in Arabidopsis are organized as well defined chromocenters from which euchromatin loops emanate

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

Dependence of heterochromatic histone H3 methylation patterns on the Arabidopsis gene DDM1.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

Phosphorylation of histone h3 at serine 10 cannot account directly for the detachment of human heterochromatin protein 1gamma from mitotic chromosomes in plant cells

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

A histone H3 methyltransferase controls DNA methylation in Neurospora crassa

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

Lsh, a member of the SNF2 family, is required for genome-wide methylation

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

Transcription regulation by histone methylation: interplay between different covalent modifications of the core histone tails

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

Translating the Histone Code

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

Arabidopsis cmt3 chromomethylase mutations block non-CG methylation and silencing of an endogenous gene

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

Requirement of CHROMOMETHYLASE3 for maintenance of CpXpG methylation

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

The MeCP1 complex represses transcription through preferential binding, remodeling, and deacetylating methylated nucleosomes

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

Rett syndrome and beyond: recurrent spontaneous and familial MECP2 mutations at CpG hotspots

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

Rett syndrome is caused by mutations in X-linked MECP2, encoding methyl-CpG-binding protein 2

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

Mi-2 complex couples DNA methylation to chromatin remodelling and histone deacetylation

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

Maintenance of genomic methylation requires a SWI2/SNF2-like protein.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

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25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

Identification and characterization of a family of mammalian methyl-CpG binding proteins

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

DNA methylation and plant development

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

Developmental abnormalities and epimutations associated with DNA hypomethylation mutations

25 August 2018

1 reference

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25 August 2018

1 reference

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Reduced DNA methylation in Arabidopsis thaliana results in abnormal plant development

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1091773

Demethylation-induced developmental pleiotropy in Arabidopsis

25 August 2018

1 reference

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Characterization of an Arabidopsis thaliana DNA hypomethylation mutant

25 August 2018

1 reference

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Chloroplast DNA polymorphisms in lodgepole and jack pines and their hybrids

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1 reference

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Chromatin methylation: who's on first?

25 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15805479

inferred from PubMed ID database lookup

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based on heuristic

Deficient in DNA methylation 1 (DDM1) defines a novel family of chromatin-remodeling factors

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15805479

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

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1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15805479

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1105/TPC.105.031567

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15805479%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

0 references

1 reference