The DNA methylation landscape of stickleback reveals patterns of sex chromosome evolution and effects of environmental salinity (Q50113983)

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scientific article published on 6 February 2018

The DNA Methylation Landscape of Stickleback Reveals Patterns of Sex Chromosome Evolution and Effects of Environmental Salinity.

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English	The DNA methylation landscape of stickleback reveals patterns of sex chromosome evolution and effects of environmental salinity	scientific article published on 6 February 2018	The DNA Methylation Landscape of Stickleback Reveals Patterns of Sex Chromosome Evolution and Effects of Environmental Salinity.

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scholarly article

1 reference

Europe PubMed Central

13 June 2018

http://europepmc.org/abstract/PMC/5841383

The DNA methylation landscape of stickleback reveals patterns of sex chromosome evolution and effects of environmental salinity (English)

1 reference

Europe PubMed Central

13 June 2018

http://europepmc.org/abstract/PMC/5841383

DNA methylation

0 references

Patricia M. Schulte

2

object named as

Patricia M Schulte

1 reference

Europe PubMed Central

13 June 2018

http://europepmc.org/abstract/PMC/5841383

David C. H. Metzger

1

object named as

David C H Metzger

1 reference

Europe PubMed Central

13 June 2018

http://europepmc.org/abstract/PMC/5841383

language of work or name

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publication date

1 March 2018

1 reference

Europe PubMed Central

13 June 2018

http://europepmc.org/abstract/PMC/5841383

Genome Biology and Evolution

1 reference

Europe PubMed Central

13 June 2018

http://europepmc.org/abstract/PMC/5841383

10

1 reference

Europe PubMed Central

13 June 2018

http://europepmc.org/abstract/PMC/5841383

775-785

1 reference

Europe PubMed Central

13 June 2018

http://europepmc.org/abstract/PMC/5841383

3

1 reference

Europe PubMed Central

13 June 2018

http://europepmc.org/abstract/PMC/5841383

Strategies for analyzing bisulfite sequencing data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

RNA-Seq analysis of salinity stress-responsive transcriptome in the liver of spotted sea bass (Lateolabrax maculatus)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Gene expression plasticity in response to salinity acclimation in threespine stickleback ecotypes from different salinity habitats

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Methylome evolution in plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Genome-wide methylation analysis identified sexually dimorphic methylated regions in hybrid tilapia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Sex differences in DNA methylation and expression in zebrafish brain: a test of an extended 'male sex drive' hypothesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

BsRADseq: screening DNA methylation in natural populations of non-model species.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Evolution of vertebrate sex chromosomes and dosage compensation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

DNA methylation epigenetically silences crossover hot spots and controls chromosomal domains of meiotic recombination in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Genome Assembly Improvement and Mapping Convergently Evolved Skeletal Traits in Sticklebacks with Genotyping-by-Sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Purifying Selection Maintains Dosage-Sensitive Genes during Degeneration of the Threespine Stickleback Y Chromosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Spatial dynamics of evolving dosage compensation in a young sex chromosome system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Coverage recommendations for methylation analysis by whole-genome bisulfite sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Gene expression responses of threespine stickleback to salinity: implications for salt-sensitive hypertension

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Contribution of genetic variation to transgenerational inheritance of DNA methylation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Transgenerational epigenetic inheritance: myths and mechanisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Epigenetic modification and inheritance in sexual reversal of fish

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Large conserved domains of low DNA methylation maintained by Dnmt3a

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Epigenomic analysis of multilineage differentiation of human embryonic stem cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

methylKit: a comprehensive R package for the analysis of genome-wide DNA methylation profiles

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Genetics of climate change adaptation

1 reference

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14 June 2018

Genome-wide genetic variations are highly correlated with proximal DNA methylation patterns

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

The genomic basis of adaptive evolution in threespine sticklebacks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Deficiency in DNA methylation increases meiotic crossover rates in euchromatic but not in heterochromatic regions in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Loss of DNA methylation affects the recombination landscape in Arabidopsis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

A genome-wide SNP genotyping array reveals patterns of global and repeated species-pair divergence in sticklebacks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Analysis of DNA methylation in a three-generation family reveals widespread genetic influence on epigenetic regulation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Conservation and divergence of methylation patterning in plants and animals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Genome-wide evolutionary analysis of eukaryotic DNA methylation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Transgenerational adaptation of Arabidopsis to stress requires DNA methylation and the function of Dicer-like proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Transgenerational Epigenetic Inheritance: Prevalence, Mechanisms, and Implications for the Study of Heredity and Evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Turnover of sex chromosomes in the stickleback fishes (gasterosteidae).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Stickleback phylogenies resolved: evidence from mitochondrial genomes and 11 nuclear genes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Molecular cytogenetic evidence of rearrangements on the Y chromosome of the threespine stickleback fish.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Nutritional control of reproductive status in honeybees via DNA methylation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Epigenetics for ecologists

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Inherited epigenetic variation--revisiting soft inheritance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Genomic DNA methylation: the mark and its mediators

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Maternal methyl supplements in mice affect epigenetic variation and DNA methylation of offspring

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Comprehensive analysis of CpG islands in human chromosomes 21 and 22

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

The rate of hydrolytic deamination of 5-methylcytosine in double-stranded DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

Molecular basis of base substitution hotspots in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 June 2018

DNA methylation, epigenetics, and evolution in vertebrates: facts and challenges

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

16 June 2018

Adaptive divergence between freshwater and marine sticklebacks: insights into the role of phenotypic plasticity from an integrated analysis of candidate gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

16 June 2018

DNA methylation and heterochromatinization in the male-specific region of the primitive Y chromosome of papaya

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

16 June 2018

Genome-Wide DNA Methylation Profiling Reveals Epigenetic Adaptation of Stickleback to Marine and Freshwater Conditions.

1 reference

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14 August 2018

Different contributions of local- and distant-regulatory changes to transcriptome divergence between stickleback ecotypes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 August 2018

Maternal stress has divergent effects on gene expression patterns in the brains of male and female threespine stickleback.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 August 2018

A universal and reliable assay for molecular sex identification of three-spined sticklebacks (Gasterosteus aculeatus).

1 reference

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14 August 2018

Genome-wide DNA methylation patterns in wild samples of two morphotypes of threespine stickleback (Gasterosteus aculeatus).

1 reference

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14 August 2018

Large hypomethylated domains serve as strong repressive machinery for key developmental genes in vertebrates.

1 reference

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14 August 2018

Gene expression plasticity evolves in response to colonization of freshwater lakes in threespine stickleback.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 August 2018

The role of methylation of DNA in environmental adaptation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 August 2018

The arcsine is asinine: the analysis of proportions in ecology.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 August 2018

Female-biased expression on the X chromosome as a key step in sex chromosome evolution in threespine sticklebacks.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 August 2018

The master sex-determination locus in threespine sticklebacks is on a nascent Y chromosome.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5841383

14 August 2018

Identifiers

10.1093/GBE/EVY034

1 reference

Europe PubMed Central

13 June 2018

http://europepmc.org/abstract/PMC/5841383

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https://api.fatcat.wiki/v0/release/6hbqtwsrcbcibn3feskrhgvgiy

24 November 2022

based on heuristic

mapped directly with Wikidata item

1 reference

Europe PubMed Central

13 June 2018

http://europepmc.org/abstract/PMC/5841383

1 reference

Europe PubMed Central

13 June 2018

http://europepmc.org/abstract/PMC/5841383

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