A single-molecule FRET sensor for monitoring DNA synthesis in real time. (Q48049117)

8 February 2018

title

A single-molecule FRET sensor for monitoring DNA synthesis in real time. (English)

1 reference

8 February 2018

Johannes Hohlbein

4

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author name string

Carel Fijen

series ordinal

1

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8 February 2018

Alejandro Montón Silva

series ordinal

2

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8 February 2018

Alejandro Hochkoeppler

series ordinal

3

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8 February 2018

language of work or name

English

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publication date

24 January 2017

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8 February 2018

Physical Chemistry Chemical Physics

number of pages

9

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based on heuristic

inferred from page(s)

published in

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8 February 2018

volume

19

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8 February 2018

issue

6

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8 February 2018

page(s)

4222-4230

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8 February 2018

https://api.crossref.org/works/10.1039%2FC6CP05919H

1 reference

PrimPol, an archaic primase/polymerase operating in human cells

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Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase

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Real-time DNA sequencing from single polymerase molecules

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Next-generation DNA sequencing

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Equilibria and kinetics of lac repressor-operator interactions by polyacrylamide gel electrophoresis

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Measurement of DNA Polymerase Incorporation Kinetics of Dye-Labeled Nucleotides Using Total Internal Reflection Fluorescence Microscopy

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Polymerase/DNA interactions and enzymatic activity: multi-parameter analysis with electro-switchable biosurfaces

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Studying DNA-protein interactions with single-molecule Förster resonance energy transfer

21 January 2018

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Biology, one molecule at a time

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Replication by a single DNA polymerase of a stretched single-stranded DNA

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Optical tweezers analysis of DNA-protein complexes.

21 January 2018

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Replication of individual DNA molecules under electronic control using a protein nanopore

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A single-molecule nanopore device detects DNA polymerase activity with single-nucleotide resolution

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Zwischenmolekulare Energiewanderung und Fluoreszenz

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Energy transfer: a spectroscopic ruler

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Single molecule measurement of the "speed limit" of DNA polymerase

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Slide into action: dynamic shuttling of HIV reverse transcriptase on nucleic acid substrates

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Dynamic binding orientations direct activity of HIV reverse transcriptase

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Single-molecule measurements of synthesis by DNA polymerase with base-pair resolution.

21 January 2018

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Real-time single-molecule studies of the motions of DNA polymerase fingers illuminate DNA synthesis mechanisms

21 January 2018

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Conformational landscapes of DNA polymerase I and mutator derivatives establish fidelity checkpoints for nucleotide insertion.

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Single-molecule DNA sequencing of a viral genome

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Reading single DNA with DNA polymerase followed by atomic force microscopy.

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DNA sequencing using polymerase substrate-binding kinetics

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FRET-based assay to screen inhibitors of HIV-1 reverse transcriptase and nucleocapsid protein

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SSB protein diffusion on single-stranded DNA stimulates RecA filament formation.

21 January 2018

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Probing single-stranded DNA conformational flexibility using fluorescence spectroscopy

21 January 2018

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Repair and genetic consequences of endogenous DNA base damage in mammalian cells

21 January 2018

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Structure and mechanism of DNA polymerase β

21 January 2018

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Fluorescence resonance energy transfer studies of DNA polymerase β: the critical role of fingers domain movements and a novel non-covalent step during nucleotide selection.

21 January 2018

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Selective Elimination of the Exonuclease Activity of the Deoxyribonucleic Acid Polymerase from Escherichia coli B by Limited Proteolysis

21 January 2018

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Alternating-laser excitation: single-molecule FRET and beyond

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Fluorescence-aided molecule sorting: analysis of structure and interactions by alternating-laser excitation of single molecules

21 January 2018

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Accurate FRET measurements within single diffusing biomolecules using alternating-laser excitation

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Camera-based single-molecule FRET detection with improved time resolution

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On the mechanism of Trolox as antiblinking and antibleaching reagent

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Defining the limits of single-molecule FRET resolution in TIRF microscopy

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3D-DART: a DNA structure modelling server

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A toolkit and benchmark study for FRET-restrained high-precision structural modeling.

21 January 2018

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Empirical Bayes methods enable advanced population-level analyses of single-molecule FRET experiments

21 January 2018

1 reference

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Förster resonance energy transfer and protein-induced fluorescence enhancement as synergetic multi-scale molecular rulers

21 January 2018

1 reference

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Increased activity and fidelity of DNA polymerase beta on single-nucleotide gapped DNA.

21 January 2018

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Temperature dependence and thermodynamics of Klenow polymerase binding to primed-template DNA.

21 January 2018

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Time Course Analysis of Enzyme-Catalyzed DNA Polymerization

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Electronic measurements of single-molecule processing by DNA polymerase I (Klenow fragment).

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Elementary steps in the DNA polymerase I reaction pathway

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Processive DNA synthesis observed in a polymerase crystal suggests a mechanism for the prevention of frameshift mutations

21 January 2018

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Analysis and suppression of DNA polymerase pauses associated with a trinucleotide consensus.

21 January 2018

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Pausing of DNA synthesis in vitro at specific loci in CTG and CGG triplet repeats from human hereditary disease genes.

21 January 2018

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Folding dynamics and conformational heterogeneity of human telomeric G-quadruplex structures in Na+ solutions by single molecule FRET microscopy

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PrimPol Is Required for Replicative Tolerance of G Quadruplexes in Vertebrate Cells

21 January 2018

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Protein induced fluorescence enhancement as a single molecule assay with short distance sensitivity

21 January 2018

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A Quantitative Theoretical Framework For Protein-Induced Fluorescence Enhancement-Förster-Type Resonance Energy Transfer (PIFE-FRET).

21 January 2018

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Characterization of dark quencher chromophores as nonfluorescent acceptors for single-molecule FRET.

21 January 2018

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Single-molecule imaging of non-equilibrium molecular ensembles on the millisecond timescale

21 January 2018

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21 January 2018

Identifiers

DOI

10.1039/C6CP05919H

1 reference

8 February 2018

PubMed ID

28116374

1 reference

8 February 2018