Higher order chromatin structures in maize and Arabidopsis (Q47674081)

4 February 2018

title

Higher order chromatin structures in maize and Arabidopsis (English)

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4 February 2018

author name string

A L Paul

series ordinal

1

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4 February 2018

R J Ferl

series ordinal

2

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language of work or name

English

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publication date

1 August 1998

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4 February 2018

published in

The Plant Cell

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4 February 2018

volume

10

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4 February 2018

issue

8

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4 February 2018

page(s)

1349-1359

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4 February 2018

Chromosomal loop anchorage of the kappa immunoglobulin gene occurs next to the enhancer in a region containing topoisomerase II sites

cites work

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Genes and loops in 320,000 base-pairs of the Drosophila melanogaster chromosome.

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Periodicity of DNA folding in higher order chromatin structures

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Isolation of matrices from maize leaf nuclei: identification of a matrix-binding site adjacent to the Adh1 gene

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Different topoisomerase II antitumor drugs direct similar specific long-range fragmentation of an amplified c-MYC gene locus in living cells and in high-salt-extracted nuclei.

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The channels model of nuclear matrix structure.

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In vivo localization of DNA topoisomerase II cleavage sites on Drosophila heat shock chromatin

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Chromosomal loop anchorage sites appear to be evolutionarily conserved

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The matrix attachment regions of the chicken lysozyme gene co-map with the boundaries of the chromatin domain.

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The nuclear matrix and the regulation of chromatin organization and function

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Analysis of the chromatin domain organisation around the plastocyanin gene reveals an MAR-specific sequence element in Arabidopsis thaliana

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Binding of matrix attachment regions to lamin polymers involves single-stranded regions and the minor groove

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Functional architecture of chromosomal DNA domains

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Excision close to matrix attachment regions of the entire chicken alpha-globin gene domain by nuclease S1 and characterization of the framing structures

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In vivo footprinting reveals unique cis-elements and different modes of hypoxic induction in maize Adh1 and Adh2

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Pulsed-field gel electrophoresis analysis of higher-order chromatin structures of Zea mays. Highly methylated DNA in the 50 kb chromatin structure

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The specificity of human lymphocyte nucleolar DNA long-range fragmentation by endogenous topoisomerase II and exogenous Bal 31 nuclease depends on cell proliferation status

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A matrix/scaffold attachment region binding protein: Identification, purification, and mode of binding

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Biological significance of unwinding capability of nuclear matrix-associating DNAs

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Mapping of genomic DNA loop organization in a 500-kilobase region of the Drosophila X chromosome by the topoisomerase II-mediated DNA loop excision protocol

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The heat shock cognate 80 gene of tomato is flanked by matrix attachment regions

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A nuclear DNA attachment element mediates elevated and position-independent gene activity

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Organization of the higher-order chromatin loop: specific DNA attachment sites on nuclear scaffold

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Developmental regulation of topoisomerase II sites and DNase I-hypersensitive sites in the chicken beta-globin locus

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Chromatin loops and transcriptional regulation

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Nonintercalative antitumor drugs interfere with the breakage-reunion reaction of mammalian DNA topoisomerase II

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Scaffold attachment regions increase reporter gene expression in stably transformed plant cells.

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In vivo topoisomerase II cleavage of the Drosophila histone and satellite III repeats: DNA sequence and structural characteristics

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Conformational constraints in nuclear DNA

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Long-range fragmentation of the eukaryotic genome by exogenous and endogenous nucleases proceeds in a specific fashion via preferential DNA cleavage at matrix attachment sites

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The size of chromatin loops in HeLa cells

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Excision of chromosomal DNA loops by treatment of permeabilised cells with Bal 31 nuclease

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DNA supercoiling in chromatin structure and gene expression

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Studies on scaffold attachment sites and their relation to genome function

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A scaffold-associated DNA region is located downstream of the pea plastocyanin gene

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The structure of histone-depleted metaphase chromosomes

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High-level transgene expression in plant cells: effects of a strong scaffold attachment region from tobacco.

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Osmium tetroxide footprinting of a scaffold attachment region in the maize Adh1 promoter

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Scaffold-associated regions: cis-acting determinants of chromatin structural loops and functional domains

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Immunoglobulin kappa gene expression after stable integration. I. Role of the intronic MAR and enhancer in plasmacytoma cells

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Torsional stress promotes the DNAase I sensitivity of active genes

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Large-scale fragmentation of mammalian DNA in the course of apoptosis proceeds via excision of chromosomal DNA loops and their oligomers

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12 December 2020

Dissection of the ability of the chicken lysozyme gene 5' matrix attachment region to stimulate transgene expression and to dampen position effects

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12 December 2020

Cleavage of DNA by mammalian DNA topoisomerase II

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Structural-functional organization of chromosomal DNA domains

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12 December 2020

The role of scaffold attachment regions in the structural and functional organization of plant chromatin

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12 December 2020

Constitutive and anaerobically induced DNase-I-hypersensitive sites in the 5' region of the maize Adh1 gene.

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Regulation of beta-glucuronidase expression in transgenic tobacco plants by an A/T-rich, cis-acting sequence found upstream of a French bean beta-phaseolin gene

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12 December 2020

Identifiers

DOI

10.1105/TPC.10.8.1349

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4 February 2018

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4 February 2018