A generic Transcriptomics Reporting Framework (TRF) for 'omics data processing and analysis. (Q47637323)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29113939%20AND%20SRC:MED&resulttype=core&format=json

9 April 2020

title

A generic Transcriptomics Reporting Framework (TRF) for 'omics data processing and analysis (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29113939%20AND%20SRC:MED&resulttype=core&format=json

9 April 2020

0 references

1 reference

1 reference

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29113939%20AND%20SRC:MED&resulttype=core&format=json

9 April 2020

Shu-Dong Zhang

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29113939%20AND%20SRC:MED&resulttype=core&format=json

9 April 2020

Carole Yauk

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29113939%20AND%20SRC:MED&resulttype=core&format=json

9 April 2020

author name string

Timothy W Gant

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29113939%20AND%20SRC:MED&resulttype=core&format=json

9 April 2020

Ursula G Sauer

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29113939%20AND%20SRC:MED&resulttype=core&format=json

9 April 2020

Brian N Chorley

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29113939%20AND%20SRC:MED&resulttype=core&format=json

9 April 2020

Stefania Perdichizzi

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29113939%20AND%20SRC:MED&resulttype=core&format=json

9 April 2020

Ben van Ravenzwaay

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29113939%20AND%20SRC:MED&resulttype=core&format=json

9 April 2020

Weida Tong

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29113939%20AND%20SRC:MED&resulttype=core&format=json

9 April 2020

Alan Poole

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29113939%20AND%20SRC:MED&resulttype=core&format=json

9 April 2020

Knut E Tollefsen

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29113939%20AND%20SRC:MED&resulttype=core&format=json

9 April 2020

language of work or name

English

0 references

publication date

4 November 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29113939%20AND%20SRC:MED&resulttype=core&format=json

Regulatory Toxicology and Pharmacology

9 April 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29113939%20AND%20SRC:MED&resulttype=core&format=json

9 April 2020

volume

91 Suppl 1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29113939%20AND%20SRC:MED&resulttype=core&format=json

9 April 2020

page(s)

S36-S45

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29113939%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

9 April 2020

limma

1 reference

22 June 2022

https://europepmc.org/article/PMC/6826341

based on heuristic

inferred from PubMed Central ID database lookup

cites work

Minimum information about a microarray experiment (MIAME)-toward standards for microarray data

1 reference

https://api.crossref.org/works/10.1016%2FJ.YRTPH.2017.11.001

Applying 'omics technologies in chemicals risk assessment: Report of an ECETOC workshop.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YRTPH.2017.11.001

Analyzing large datasets with bootstrap penalization

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YRTPH.2017.11.001

Normalization and gene p-value estimation: issues in microarray data processing

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YRTPH.2017.11.001

In pursuit of effective toxicogenomics.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YRTPH.2017.11.001

The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YRTPH.2017.11.001

The challenge of the application of 'omics technologies in chemicals risk assessment: Background and outlook.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YRTPH.2017.11.001

Cross-platform comparability of microarray technology: intra-platform consistency and appropriate data analysis procedures are essential

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YRTPH.2017.11.001

The balance of reproducibility, sensitivity, and specificity of lists of differentially expressed genes in microarray studies

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YRTPH.2017.11.001

The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YRTPH.2017.11.001

Iterative rank-order normalization of gene expression microarray data

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YRTPH.2017.11.001

Evaluation of gene expression data generated from expired Affymetrix GeneChip® microarrays using MAQC reference RNA samples

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YRTPH.2017.11.001

A statistical framework for the design of microarray experiments and effective detection of differential gene expression

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YRTPH.2017.11.001

Effect of pooling samples on the efficiency of comparative studies using microarrays

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YRTPH.2017.11.001

Standardization efforts enabling next-generation sequencing and microarray based biomarkers for precision medicine

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YRTPH.2017.11.001

Reproducible Research in Computational Science

7 January 2021

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/29113939

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The FDA's Experience with Emerging Genomics Technologies-Past, Present, and Future

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/29113939

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.YRTPH.2017.11.001

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29113939%20AND%20SRC:MED&resulttype=core&format=json

9 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29113939%20AND%20SRC:MED&resulttype=core&format=json

9 April 2020

1 reference