Dynamic antagonism between phytochromes and PIF family basic helix-loop-helix factors induces selective reciprocal responses to light and shade in a rapidly responsive transcriptional network in Arabidopsis. (Q46427541)

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scientific article published on 18 April 2012

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English	Dynamic antagonism between phytochromes and PIF family basic helix-loop-helix factors induces selective reciprocal responses to light and shade in a rapidly responsive transcriptional network in Arabidopsis.	scientific article published on 18 April 2012

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scholarly article

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29 January 2020

Dynamic antagonism between phytochromes and PIF family basic helix-loop-helix factors induces selective reciprocal responses to light and shade in a rapidly responsive transcriptional network in Arabidopsis (English)

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29 January 2020

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29 January 2020

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James M Tepperman

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29 January 2020

Megan M Cohn

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29 January 2020

Elena Monte

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29 January 2020

Bassem Al-Sady

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Erika Erickson

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29 January 2020

Peter H Quail

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18 April 2012

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29 January 2020

1398-1419

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29 January 2020

Phytochrome action in light-grown mustard: kinetics, fluence-rate compensation and ecological significance.

1 reference

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26 August 2018

Phytochrome signaling in green Arabidopsis seedlings: impact assessment of a mutually negative phyB-PIF feedback loop

1 reference

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26 August 2018

Phytochrome-imposed oscillations in PIF3 protein abundance regulate hypocotyl growth under diurnal light/dark conditions in Arabidopsis

1 reference

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26 August 2018

Phytochrome-interacting factor 4 (PIF4) regulates auxin biosynthesis at high temperature

1 reference

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26 August 2018

Functional profiling identifies genes involved in organ-specific branches of the PIF3 regulatory network in Arabidopsis

1 reference

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26 August 2018

Out of the shade and into the light

1 reference

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26 August 2018

Cryptochrome 1 and phytochrome B control shade-avoidance responses in Arabidopsis via partially independent hormonal cascades

1 reference

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26 August 2018

Blue-light-mediated shade avoidance requires combined auxin and brassinosteroid action in Arabidopsis seedlings

1 reference

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26 August 2018

Genomic analysis of circadian clock-, light-, and growth-correlated genes reveals PHYTOCHROME-INTERACTING FACTOR5 as a modulator of auxin signaling in Arabidopsis

1 reference

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26 August 2018

Automated analysis of hypocotyl growth dynamics during shade avoidance in Arabidopsis

1 reference

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26 August 2018

Auxin transport through PIN-FORMED 3 (PIN3) controls shade avoidance and fitness during competition

1 reference

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26 August 2018

PIFs: pivotal components in a cellular signaling hub

1 reference

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26 August 2018

Light quality-mediated petiole elongation in Arabidopsis during shade avoidance involves cell wall modification by xyloglucan endotransglucosylase/hydrolases.

1 reference

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26 August 2018

1 reference

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26 August 2018

Involvement of auxin and brassinosteroid in the regulation of petiole elongation under the shade.

1 reference

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26 August 2018

Direct regulation of phytoene synthase gene expression and carotenoid biosynthesis by phytochrome-interacting factors.

1 reference

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26 August 2018

The phytohormone signal network regulating elongation growth during shade avoidance.

1 reference

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26 August 2018

Arabidopsis thaliana life without phytochromes.

1 reference

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26 August 2018

Definition of early transcriptional circuitry involved in light-induced reversal of PIF-imposed repression of photomorphogenesis in young Arabidopsis seedlings.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398554

26 August 2018

Inhibition of the shade avoidance response by formation of non-DNA binding bHLH heterodimers

1 reference

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26 August 2018

Phytochrome functions in Arabidopsis development

1 reference

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26 August 2018

Phytochrome interacting factors 4 and 5 redundantly limit seedling de-etiolation in continuous far-red light.

1 reference

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26 August 2018

A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398554

26 August 2018

ATHB4, a regulator of shade avoidance, modulates hormone response in Arabidopsis seedlings.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398554

26 August 2018

PIF3 is a repressor of chloroplast development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398554

26 August 2018

Phytochromes promote seedling light responses by inhibiting four negatively-acting phytochrome-interacting factors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398554

26 August 2018

High temperature-mediated adaptations in plant architecture require the bHLH transcription factor PIF4.

1 reference

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26 August 2018

Genome-wide analysis of genes targeted by PHYTOCHROME INTERACTING FACTOR 3-LIKE5 during seed germination in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398554

26 August 2018

Multiple phytochrome-interacting bHLH transcription factors repress premature seedling photomorphogenesis in darkness

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398554

26 August 2018

Auxin receptors and plant development: a new signaling paradigm

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3398554

26 August 2018

PIF1 directly and indirectly regulates chlorophyll biosynthesis to optimize the greening process in Arabidopsis

1 reference

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26 August 2018

Light-induced phosphorylation and degradation of the negative regulator PHYTOCHROME-INTERACTING FACTOR1 from Arabidopsis depend upon its direct physical interactions with photoactivated phytochromes

1 reference

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26 August 2018

Rapid Synthesis of Auxin via a New Tryptophan-Dependent Pathway Is Required for Shade Avoidance in Plants

1 reference

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26 August 2018

Decoding of light signals by plant phytochromes and their interacting proteins

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26 August 2018

The Arabidopsis phytochrome-interacting factor PIF7, together with PIF3 and PIF4, regulates responses to prolonged red light by modulating phyB levels

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26 August 2018

Mechanistic duality of transcription factor function in phytochrome signaling

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26 August 2018

A molecular framework for light and gibberellin control of cell elongation

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26 August 2018

Coordinated regulation of Arabidopsis thaliana development by light and gibberellins.

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26 August 2018

The basic helix-loop-helix transcription factor PIF5 acts on ethylene biosynthesis and phytochrome signaling by distinct mechanisms

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26 August 2018

Phytochrome-mediated inhibition of shade avoidance involves degradation of growth-promoting bHLH transcription factors.

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26 August 2018

Interaction of shade avoidance and auxin responses: a role for two novel atypical bHLH proteins

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26 August 2018

Phytochrome Interacting Factors: central players in phytochrome-mediated light signaling networks

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26 August 2018

Out of the dark: how the PIFs are unmasking a dual temporal mechanism of phytochrome signalling

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26 August 2018

Phytochrome induces rapid PIF5 phosphorylation and degradation in response to red-light activation

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26 August 2018

Canopy shade causes a rapid and transient arrest in leaf development through auxin-induced cytokinin oxidase activity.

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Rhythmic growth explained by coincidence between internal and external cues.

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DELLA protein function in growth responses to canopy signals.

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26 August 2018

PIL5, a phytochrome-interacting bHLH protein, regulates gibberellin responsiveness by binding directly to the GAI and RGA promoters in Arabidopsis seeds

1 reference

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PIF3 regulates anthocyanin biosynthesis in an HY5-dependent manner with both factors directly binding anthocyanin biosynthetic gene promoters in Arabidopsis.

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26 August 2018

Light-regulated transcriptional networks in higher plants

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26 August 2018

Photoactivated phytochrome induces rapid PIF3 phosphorylation prior to proteasome-mediated degradation.

1 reference

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26 August 2018

Light activates the degradation of PIL5 protein to promote seed germination through gibberellin in Arabidopsis.

1 reference

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26 August 2018

Phytochrome structure and signaling mechanisms.

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26 August 2018

PIF1 is regulated by light-mediated degradation through the ubiquitin-26S proteasome pathway to optimize photomorphogenesis of seedlings in Arabidopsis

1 reference

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26 August 2018

A dynamic balance between gene activation and repression regulates the shade avoidance response in Arabidopsis

1 reference

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26 August 2018

The phytochrome-interacting transcription factor, PIF3, acts early, selectively, and positively in light-induced chloroplast development

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26 August 2018

Light-regulated nuclear localization of phytochromes

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26 August 2018

PIL5, a phytochrome-interacting basic helix-loop-helix protein, is a key negative regulator of seed germination in Arabidopsis thaliana.

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26 August 2018

Phytochrome-interacting factor 1 is a critical bHLH regulator of chlorophyll biosynthesis.

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26 August 2018

Circadian-controlled basic/helix-loop-helix factor, PIL6, implicated in light-signal transduction in Arabidopsis thaliana.

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26 August 2018

Degradation of phytochrome interacting factor 3 in phytochrome-mediated light signaling.

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26 August 2018

Constitutive photomorphogenesis 1 and multiple photoreceptors control degradation of phytochrome interacting factor 3, a transcription factor required for light signaling in Arabidopsis

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26 August 2018

Expression profiling of phyB mutant demonstrates substantial contribution of other phytochromes to red-light-regulated gene expression during seedling de-etiolation

1 reference

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26 August 2018

Gating of the rapid shade-avoidance response by the circadian clock in plants.

1 reference

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26 August 2018

A genomic analysis of the shade avoidance response in Arabidopsis

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26 August 2018

Functional Characterization of Phytochrome Interacting Factor 3 in Phytochrome-Mediated Light Signal Transduction

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26 August 2018

Ethylene and auxin control the Arabidopsis response to decreased light intensity.

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26 August 2018

Isolation and characterization of phyC mutants in Arabidopsis reveals complex crosstalk between phytochrome signaling pathways.

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26 August 2018

Three redundant brassinosteroid early response genes encode putative bHLH transcription factors required for normal growth

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26 August 2018

Phytochrome in cotyledons regulates the expression of genes in the hypocotyl through auxin-dependent and -independent pathways

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26 August 2018

PIF4, a phytochrome-interacting bHLH factor, functions as a negative regulator of phytochrome B signaling in Arabidopsis.

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26 August 2018

Gene Expression Omnibus: NCBI gene expression and hybridization array data repository

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26 August 2018

Direct targeting of light signals to a promoter element-bound transcription factor.

1 reference

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26 August 2018

Shade avoidance responses are mediated by the ATHB-2 HD-zip protein, a negative regulator of gene expression

1 reference

https://pubmed.ncbi.nlm.nih.gov/22517317

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Hormonal regulation of temperature-induced growth in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/22517317

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A new class of transcription factors mediates brassinosteroid-regulated gene expression in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/22517317

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Shade avoidance

1 reference

https://pubmed.ncbi.nlm.nih.gov/22517317

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of primary target genes of phytochrome signaling. Early transcriptional control during shade avoidance responses in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/22517317

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1105/TPC.112.095711

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22517317%20AND%20SRC:MED&resulttype=core&format=json

29 January 2020

PMC publication ID

0 references

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22517317%20AND%20SRC:MED&resulttype=core&format=json

29 January 2020

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