Species delimitation with gene flow: A methodological comparison and population genomics approach to elucidate cryptic species boundaries in Malaysian Torrent Frogs (Q46321965)

From Wikidata

Jump to navigation Jump to search

scientific article

Language	Label	Description	Also known as
English	Species delimitation with gene flow: A methodological comparison and population genomics approach to elucidate cryptic species boundaries in Malaysian Torrent Frogs	scientific article

Statements

scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/28802073

Species delimitation with gene flow: A methodological comparison and population genomics approach to elucidate cryptic species boundaries in Malaysian Torrent Frogs (English)

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/28802073

0 references

cryptic species complex

0 references

0 references

1 reference

based on heuristic

inferred from title

1

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28802073%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

Alana Alexander

2

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28802073%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

6

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28802073%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

3

object named as

L Lee Grismer

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28802073%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

Jesse Leland Grismer

5

object named as

Jesse L Grismer

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28802073%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

7

object named as

Rafe M Brown

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28802073%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

object named as

Yong-Chao Su

4

0 references

publication date

12 August 2017

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/28802073

Molecular Ecology

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28802073%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

26

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28802073%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

20

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28802073%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

5435-5450

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28802073%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

Multiplexed shotgun genotyping for rapid and efficient genetic mapping

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

The challenge of species delimitation at the extremes: diversification without morphological change in philippine sun skinks

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

RAD genotyping reveals fine-scale genetic structuring and provides powerful population assignment in a widely distributed marine species, the American lobster (Homarus americanus).

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Inferring species trees directly from biallelic genetic markers: bypassing gene trees in a full coalescent analysis.

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Population genomics based on low coverage sequencing: how low should we go?

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Species delimitation with ABC and other coalescent-based methods: a test of accuracy with simulations and an empirical example with lizards of the Liolaemus darwinii complex (Squamata: Liolaemidae).

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Population differentiation determined from putative neutral and divergent adaptive genetic markers in Eulachon (Thaleichthys pacificus, Osmeridae), an anadromous Pacific smelt

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

How to fail at species delimitation

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Stacks: an analysis tool set for population genomics

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Did true frogs 'dispersify'?

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

A New Species of Frog (Amphibia: Anura: Ranidae) of the Hylarana signata Complex from Peninsular Malaysia

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Reappraisal of the Javanese Bullfrog complex, Kaloula baleata (Müller, 1836) (Amphibia: Anura: Microhylidae), reveals a new species from Peninsular Malaysia

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Polyphyly of Asian Tree Toads, Genus Pedostibes Günther, 1876 (Anura: Bufonidae), and the Description of a New Genus from Southeast Asia

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Relative rates of nucleotide substitution in frogs

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Bayesian Evolutionary Analysis with BEAST

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Testing for ancient admixture between closely related populations

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

PyRAD: assembly of de novo RADseq loci for phylogenetic analyses

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Historical introgression among the American live oaks and the comparative nature of tests for introgression

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Inferring phylogeny and introgression using RADseq data: an example from flowering plants (Pedicularis: Orobanchaceae)

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

SpedeSTEM: a rapid and accurate method for species delimitation.

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Robust demographic inference from genomic and SNP data

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Underestimation of species richness in neotropical frogs revealed by mtDNA analyses

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Fast and efficient estimation of individual ancestry coefficients.

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Coalescent-based species delimitation in an integrative taxonomy

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Reservoirs of richness: least disturbed tropical forests are centres of undescribed species diversity.

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Integrative taxonomy uncovers high levels of cryptic species diversity inHemiphyllodactylus Bleeker, 1860 (Squamata: Gekkonidae) and the description of a new species from Peninsular Malaysia

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Systematics and natural history of Southeast Asian Rock Geckos (genus Cnemaspis Strauch, 1887) with descriptions of eight new species from Malaysia, Thailand, and Indonesia

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Inferring the joint demographic history of multiple populations from multidimensional SNP frequency data

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Similarity thresholds used in DNA sequence assembly from short reads can reduce the comparability of population histories across species

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Along the speciation continuum in sticklebacks.

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Unforeseen Consequences of Excluding Missing Data from Next-Generation Sequences: Simulation Study of RAD Sequences

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Species Delimitation with Gene Flow

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Genetic structure of the snakehead murrel, Channa striata (channidae) based on the cytochrome c oxidase subunit I gene: Influence of historical and geomorphological factors

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

adegenet: a R package for the multivariate analysis of genetic markers

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Discriminant analysis of principal components: a new method for the analysis of genetically structured populations

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

G(ST) and its relatives do not measure differentiation

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Sparse non-negative matrix factorizations via alternating non-negativity-constrained least squares for microarray data analysis

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Estimating a geographically explicit model of population divergence

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Genotyping by sequencing resolves shallow population structure to inform conservation of Chinook salmon (Oncorhynchus tshawytscha).

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Short tree, long tree, right tree, wrong tree: new acquisition bias corrections for inferring SNP phylogenies

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Species delimitation using genome-wide SNP data

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

The fine-scale genetic structure of the British population

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

A likelihood approach to estimating phylogeny from discrete morphological character data

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Removing allometric effects of body size in morphological analysis

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

The Role of Systematics in Biology: The study of all aspects of the diversity of life is one of the most important concerns in biology

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Evidence for ecology's role in speciation

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Of Least Concern? Systematics of a cryptic species complex: Limnonectes kuhlii (Amphibia: Anura: Dicroglossidae).

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Population Genetics Methods Applied to a Species Delimitation Problem: Endemic Trumpet Daffodils (Narcissus Section Pseudonarcissi) from the Southern Iberian Peninsula

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

The trouble with isolation by distance.

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Assessing population structure: F(ST) and related measures

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Ultrafast approximation for phylogenetic bootstrap

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Biodiversity hotspots for conservation priorities

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Recent divergence with gene flow in Tennessee cave salamanders (Plethodontidae: Gyrinophilus ) inferred from gene genealogies

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Speciation with gene flow could be common

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Ancient admixture in human history

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Gene flow and species delimitation

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Ernst Mayr and the modern concept of species

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Species concepts and species delimitation

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Species delimitation under the general lineage concept: an empirical example using wild North American hops (Cannabaceae: Humulus lupulus).

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Navigating the pitfalls and promise of landscape genetics.

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

genepop'007: a complete re-implementation of the genepop software for Windows and Linux

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Inferring phylogenies from RAD sequence data

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Ecological speciation

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Evidence for ecological speciation and its alternative

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Genetic isolation by environment or distance: which pattern of gene flow is most common?

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Southeast Asian biodiversity: an impending disaster

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Bayesian species delimitation combining multiple genes and traits in a unified framework.

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Understanding the origin of species with genome-scale data: modelling gene flow

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Diversification and asymmetrical gene flow across time and space: lineage sorting and hybridization in polytypic barking frogs

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

The phylogenetic problem of Huia (Amphibia: Ranidae)

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Multispecies coalescent delimits structure, not species

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Effects of phylogenetic reconstruction method on the robustness of species delimitation using single-locus data

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Quantitative criteria for species delimitation

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Deciphering amphibian diversity through DNA barcoding: chances and challenges

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Comparative performance of the 16S rRNA gene in DNA barcoding of amphibians

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Genome-wide RAD sequence data provide unprecedented resolution of species boundaries and relationships in the Lake Victoria cichlid adaptive radiation

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Delimiting species using DNA and morphological variation and discordant species limits in spiny lizards (Sceloporus).

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Navjot's nightmare revisited: logging, agriculture, and biodiversity in Southeast Asia

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

The BPP program for species tree estimation and species delimitation

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Bayesian species delimitation using multilocus sequence data

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Hidden histories of gene flow in highland birds revealed with genomic markers

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

A general species delimitation method with applications to phylogenetic placements

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Evaluation of a bayesian coalescent method of species delimitation

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

DNA-based species delimitation in algae

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

genotype and genodive: two programs for the analysis of genetic diversity of asexual organisms

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Species richness as criterion for global conservation area placement leads to large losses in coverage of biodiversity

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

and D do not replace FST

1 reference

https://api.crossref.org/works/10.1111%2FMEC.14296

21 January 2018

Identifiers

10.1111/MEC.14296

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28802073%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28802073%20AND%20SRC:MED&resulttype=core&format=json

9 June 2020

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q46321965&oldid=2147386104"