Expression Atlas: gene and protein expression across multiple studies and organisms. (Q46256149)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

title

Expression Atlas: gene and protein expression across multiple studies and organisms (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

19

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

Juan Antonio Vizcaíno

20

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

Irene Papatheodorou

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

Nuno A. Fonseca

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

Maria C Keays

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

Amy Y Tang

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

Elisabet Barrera Casanova

3 April 2020

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

Melissa Burke

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

Anja Füllgrabe

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

Suhaib Mohammed

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

Pankaj Jaiswal

16

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

Andrew F Jarnuczak

17

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

Wolfgang Huber

18

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

Alvis Brazma

21

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

Robert Petryszak

22

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

author name string

Wojciech Bazant

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

Alfonso Muñoz-Pomer Fuentes

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

Nancy George

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

Laura Huerta

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

Satu Koskinen

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

Matthew Geniza

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

Justin Preece

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

language of work or name

English

0 references

publication date

1 January 2018

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

published in

Nucleic Acids Research

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

volume

46

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

page(s)

D246-D251

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

issue

D1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

3 April 2020

copyright license

start time

20 November 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

The RNASeq-er API - a gateway to systematically updated analysis of public RNA-Seq data.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753389

A Golden Age for Working with Public Proteomics Data

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753389

Ensembl Plants: Integrating Tools for Visualizing, Mining, and Analyzing Plant Genomic Data.

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753389

The ProteomeXchange consortium in 2017: supporting the cultural change in proteomics public data deposition

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753389

Open Targets: a platform for therapeutic target identification and validation

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753389

European Nucleotide Archive in 2016

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753389

HDBR Expression: A Unique Resource for Global and Individual Gene Expression Studies during Early Human Brain Development

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753389

The MaxQuant computational platform for mass spectrometry-based shotgun proteomics

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753389

Plant Reactome: a resource for plant pathways and comparative analysis

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753389

The human-induced pluripotent stem cell initiative-data resources for cellular genetics

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753389

2016 update of the PRIDE database and its related tools.

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753389

OpenMS: a flexible open-source software platform for mass spectrometry data analysis

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753389

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753389

The Reactome pathway Knowledgebase

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753389

Ensembl Genomes 2016: more genomes, more complexity

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753389

WormBase 2016: expanding to enable helminth genomic research

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753389

Gramene 2016: comparative plant genomics and pathway resources

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753389

Expression Atlas update--an integrated database of gene and protein expression in humans, animals and plants.

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753389

Mapping RNA-seq Reads with STAR

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753389

Integrative analysis of 111 reference human epigenomes

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753389

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753389

ArrayExpress update--simplifying data submissions

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753389

The complex portal--an encyclopaedia of macromolecular complexes

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753389

HTSeq--a Python framework to work with high-throughput sequencing data

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753389

BLUEPRINT: mapping human blood cell epigenomes

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753389

Transcriptome analysis of human tissues and cell lines reveals one dominant transcript per gene

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753389

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753389

NCBI GEO: archive for functional genomics data sets--update

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753389

The Sequence Read Archive: explosive growth of sequencing data.

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753389

Modeling sample variables with an Experimental Factor Ontology

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753389

The Genotype-Tissue Expression (GTEx) project

24 May 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKX1158

21 January 2018

Identifiers

DOI

10.1093/NAR/GKX1158

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

journals/nar/PapatheodorouFK18

3 April 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29165655%20AND%20SRC:MED&resulttype=core&format=json

3 April 2020

1 reference