Evaluating Fast Maximum Likelihood-Based Phylogenetic Programs Using Empirical Phylogenomic Data Sets (Q46253852)

15 June 2018

title

Evaluating Fast Maximum Likelihood-Based Phylogenetic Programs Using Empirical Phylogenomic Data Sets. (English)

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15 June 2018

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4

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http://europepmc.org/abstract/MED/29177474

20 December 2017

Xiaofan Zhou

object named as

Xiaofan Zhou

series ordinal

1

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author name string

Chris Todd Hittinger

series ordinal

3

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15 June 2018

Xing-Xing Shen

series ordinal

2

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15 June 2018

publication date

1 February 2018

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15 June 2018

Molecular Biology and Evolution

published in

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15 June 2018

volume

35

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15 June 2018

issue

2

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15 June 2018

page(s)

486-503

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15 June 2018

Creative Commons Attribution-NonCommercial 4.0 International

copyright license

start time

21 November 2017

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April 2022 Public Data File from Crossref

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5850867

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1 reference

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A new view of the tree of life

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1 reference

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A Genome-Scale Investigation of How Sequence, Function, and Tree-Based Gene Properties Influence Phylogenetic Inference

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1 reference

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Fast Coalescent-Based Computation of Local Branch Support from Quartet Frequencies

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1 reference

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Terrace Aware Data Structure for Phylogenomic Inference from Supermatrices

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1 reference

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1 reference

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Extracting phylogenetic signal and accounting for bias in whole-genome data sets supports the Ctenophora as sister to remaining Metazoa

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Statistical binning enables an accurate coalescent-based estimation of the avian tree

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1 reference

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Whole-genome analyses resolve early branches in the tree of life of modern birds

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1 reference

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IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5850867

The phylogenetic likelihood library.

16 June 2018

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16 June 2018

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Coalescent versus concatenation methods and the placement of Amborella as sister to water lilies

16 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5850867

Latent homology and convergent regulatory evolution underlies the repeated emergence of yeasts.

16 June 2018

1 reference

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RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

16 June 2018

1 reference

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Resolving conflict in eutherian mammal phylogeny using phylogenomics and the multispecies coalescent model

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1 reference

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Molecular phylogenetics: principles and practice

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1 reference

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RAxML and FastTree: comparing two methods for large-scale maximum likelihood phylogeny estimation

16 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5850867

Characterizing the phylogenetic tree-search problem

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1 reference

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New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

Crossref

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX302

21 January 2018

Identifiers

DOI

10.1093/MOLBEV/MSX302

1 reference

15 June 2018

PMCID

5850867

1 reference

15 June 2018

PubMed ID

29177474

1 reference

15 June 2018