Performance of forty-one microbial source tracking methods: a twenty-seven lab evaluation study. (Q45995070)

18 December 2017

title

Performance of forty-one microbial source tracking methods: a twenty-seven lab evaluation study. (English)

1 reference

18 December 2017

Stephen B Weisberg

8

0 references

Orin C Shanks

6

object named as

Orin C Shanks

1 reference

18 December 2017

Alexandria Boehm

1

object named as

Alexandria B Boehm

1 reference

18 December 2017

author name string

Laurie C Van De Werfhorst

2

1 reference

18 December 2017

John F Griffith

3

1 reference

18 December 2017

Patricia A Holden

4

1 reference

18 December 2017

Jenny A Jay

5

1 reference

18 December 2017

Dan Wang

7

1 reference

18 December 2017

language of work or name

English

0 references

publication date

5 July 2013

1 reference

18 December 2017

number of pages

17

1 reference

based on heuristic

inferred from page(s)

published in

Water Research

1 reference

18 December 2017

volume

47

1 reference

18 December 2017

issue

18

1 reference

18 December 2017

page(s)

6812-6828

1 reference

18 December 2017

Performance evaluation of canine-associated Bacteroidales assays in a multi-laboratory comparison study.

cites work

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

A PCR assay To discriminate human and ruminant feces on the basis of host differences in Bacteroides-Prevotella genes encoding 16S rRNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Growth and survival of Escherichia coli and enterococci populations in the macro-alga Cladophora (Chlorophyta)

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Effectiveness of qPCR permutations, internal controls and dilution as means for minimizing the impact of inhibition while measuring Enterococcus in environmental waters.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Evaluation of molecular community analysis methods for discerning fecal sources and human waste

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Bacteroidales terminal restriction fragment length polymorphism (TRFLP) for fecal source differentiation in comparison to and in combination with universal bacteria TRFLP.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Application of an integrated community analysis approach for microbial source tracking in a coastal creek

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Evaluation of removal of noroviruses during wastewater treatment, using real-time reverse transcription-PCR: different behaviors of genogroups I and II

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Host distributions of uncultivated fecal Bacteroidales bacteria reveal genetic markers for fecal source identification

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Detection, quantitation and identification of enteroviruses from surface waters and sponge tissue from the Florida Keys using real-time RT–PCR

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Application of phylogenetic microarray analysis to discriminate sources of fecal pollution.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Geographical stability of enterococcal antibiotic resistance profiles in Europe and its implications for the identification of fecal sources

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

The application of a recently isolated strain of Bacteroides (GB-124) to identify human sources of faecal pollution in a temperate river catchment.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Rapid detection of enteroviruses in small volumes of natural waters by real-time quantitative reverse transcriptase PCR

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Evaluation of two library-independent microbial source tracking methods to identify sources of fecal contamination in French estuaries

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Rapid one-step quantitative reverse transcriptase PCR assay with competitive internal positive control for detection of enteroviruses in environmental samples

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Evaluation of microbial source tracking methods using mixed fecal sources in aqueous test samples.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Chemical-based fecal source tracking methods: current status and guidelines for evaluation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Escherichia coli populations in Great Lakes waterfowl exhibit spatial stability and temporal shifting

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Evaluation of genetic markers from the 16S rRNA gene V2 region for use in quantitative detection of selected Bacteroidales species and human fecal waste by qPCR.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Relative decay of fecal indicator bacteria and human-associated markers: a microcosm study simulating wastewater input into seawater and freshwater

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Putative temporal variability of Escherichia coli ribotypes from yearling steers.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

A real-time qPCR assay for the detection of the nifH gene of Methanobrevibacter smithii, a potential indicator of sewage pollution.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Quantitative real-time PCR assays for detection of human adenoviruses and identification of serotypes 40 and 41.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

16S rRNA-based assays for quantitative detection of universal, human-, cow-, and dog-specific fecal Bacteroidales: a Bayesian approach

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Development of Bacteroides 16S rRNA gene TaqMan-based real-time PCR assays for estimation of total, human, and bovine fecal pollution in water

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Performance of human fecal anaerobe-associated PCR-based assays in a multi-laboratory method evaluation study.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Development and application of a quantitative PCR assay targeting Catellicoccus marimammalium for assessing gull-associated fecal contamination at Lake Erie beaches.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Evaluation of new gyrB-based real-time PCR system for the detection of B. fragilis as an indicator of human-specific fecal contamination

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Phylogenetic diversity and molecular detection of bacteria in gull feces

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Use of eukaryotic mitochondrial DNA to differentiate human, bovine, porcine and ovine sources in fecally contaminated surface water

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Lack of specificity for PCR assays targeting human Bacteroides 16S rRNA gene: cross-amplification with fish feces.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Quantification of human polyomaviruses JC Virus and BK Virus by TaqMan quantitative PCR and comparison to other water quality indicators in water and fecal samples

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Phylogenetic analysis of Bacteroidales 16S rRNA gene sequences from human and animal effluents and assessment of ruminant faecal pollution by real-time PCR.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Use of viral pathogens and indicators to differentiate between human and non-human fecal contamination in a microbial source tracking comparison study.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Relationship between F-specific RNA phage genogroups, faecal pollution indicators and human adenoviruses in river water

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Review of epidemiological studies on health effects from exposure to recreational water

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Quantitative PCR method for sensitive detection of ruminant fecal pollution in freshwater and evaluation of this method in alpine karstic regions.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

A quantitative real-time PCR assay for the highly sensitive and specific detection of human faecal influence in spring water from a large alpine catchment area

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Fecal bacteroidales diversity and decay in response to variations in temperature and salinity

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Detection and quantification of the human-specific HF183 Bacteroides 16S rRNA genetic marker with real-time PCR for assessment of human faecal pollution in freshwater.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Quantitative PCR for detection and enumeration of genetic markers of bovine fecal pollution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Quantitative PCR for genetic markers of human fecal pollution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Performance assessment PCR-based assays targeting bacteroidales genetic markers of bovine fecal pollution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Performance of PCR-based assays targeting Bacteroidales genetic markers of human fecal pollution in sewage and fecal samples.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Evaluation of conventional and alternative monitoring methods for a recreational marine beach with nonpoint source of fecal contamination.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Traditional and molecular analyses for fecal indicator bacteria in non-point source subtropical recreational marine waters.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Improved strategies and optimization of calibration models for real-time PCR absolute quantification

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Estimated human health risks from exposure to recreational waters impacted by human and non-human sources of faecal contamination

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Comparison of seven protocols to identify fecal contamination sources using Escherichia coli

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Performance, design, and analysis in microbial source tracking studies

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Use of barcoded pyrosequencing and shared OTUs to determine sources of fecal bacteria in watersheds.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Comparison of the host specificities of two bacteroidales quantitative PCR assays used for tracking human fecal contamination

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Isolation and characterization of Bacteroides host strain HB-73 used to detect sewage specific phages in Hawaii

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Do U.S. Environmental Protection Agency water quality guidelines for recreational waters prevent gastrointestinal illness? A systematic review and meta-analysis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Persistence of nucleic acid markers of health-relevant organisms in seawater microcosms: implications for their use in assessing risk in recreational waters

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Use of antibiotic resistance analysis for representativeness testing of multiwatershed libraries

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Beach sands along the California coast are diffuse sources of fecal bacteria to coastal waters

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

Use of a Bacteroides thetaiotaomicron-specific alpha-1-6, mannanase quantitative PCR to detect human faecal pollution in water.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2012.12.046

10.1016/J.WATRES.2012.12.046

7 January 2021

Identifiers

DOI

1 reference

18 December 2017

PubMed ID

23880218

1 reference

18 December 2017