Archaeal proviruses TKV4 and MVV extend the PRD1-adenovirus lineage to the phylum Euryarchaeota (Q45162308)

10 December 2017

Archaeal proviruses TKV4 and MVV extend the PRD1-adenovirus lineage to the phylum Euryarchaeota (English)

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10 December 2017

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10 December 2017

Dennis H Bamford

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PubMed ID

18308362

10 December 2017

language of work or name

English

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publication date

4 March 2008

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10 December 2017

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10 December 2017

375

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10 December 2017

1

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10 December 2017

292-300

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

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Do viruses form lineages across different domains of life?

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What does structure tell us about virus evolution?

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Constituents of SH1, a novel lipid-containing virus infecting the halophilic euryarchaeon Haloarcula hispanica

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Viral evolution revealed by bacteriophage PRD1 and human adenovirus coat protein structures

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Does common architecture reveal a viral lineage spanning all three domains of life?

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Replication of bacteriophage PM2 deoxyribonucleic acid: A closed circular double-stranded molecule

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Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes

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3D-Jury: a simple approach to improve protein structure predictions

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Evolutionary relationships among diverse bacteriophages and prophages: all the world's a phage

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VMD: visual molecular dynamics

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The structure of a putative scaffolding protein of immature poxvirus particles as determined by electron microscopy suggests similarity with capsid proteins of large icosahedral DNA viruses

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Conserved sequence motifs in the initiator proteins for rolling circle DNA replication encoded by diverse replicons from eubacteria, eucaryotes and archaebacteria

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Structure of an archaeal virus capsid protein reveals a common ancestry to eukaryotic and bacterial viruses

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Crystal structure of F-93 from Sulfolobus spindle-shaped virus 1, a winged-helix DNA binding protein

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Putative prophages related to lytic tailless marine dsDNA phage PM2 are widespread in the genomes of aquatic bacteria

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Membrane proteins modulate the bilayer curvature in the bacterial virus Bam35.

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Structure validation by Calpha geometry: phi,psi and Cbeta deviation

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Characterization of the archaeal thermophile Sulfolobus turreted icosahedral virus validates an evolutionary link among double-stranded DNA viruses from all domains of life

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MCM proteins and DNA replication

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The complete genome sequence of PM2, the first lipid-containing bacterial virus To Be isolated

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Comparative protein structure modeling of genes and genomes

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Eukaryotic/Archaeal Primase and MCM Proteins Encoded in a Bacteriophage Genome

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The structure and evolution of the major capsid protein of a large, lipid-containing DNA virus

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SH1: A novel, spherical halovirus isolated from an Australian hypersaline lake.

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Evolutionary genomics of archaeal viruses: unique viral genomes in the third domain of life

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Transfer RNA genes frequently serve as integration sites for prokaryotic genetic elements.

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The structure of a thermophilic archaeal virus shows a double-stranded DNA viral capsid type that spans all domains of life

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Multiple protein sequence alignment from tertiary structure comparison: assignment of global and residue confidence levels

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Archaeal integrases and mechanisms of gene capture

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In vitro DNA packaging of PRD1: a common mechanism for internal-membrane viruses.

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CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

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GIL16, a new gram-positive tectiviral phage related to the Bacillus thuringiensis GIL01 and the Bacillus cereus pBClin15 elements

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A novel rudivirus, ARV1, of the hyperthermophilic archaeal genus Acidianus

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Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya

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Isolation and characterization of an archaebacterial viruslike particle from Methanococcus voltae A3

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The marine algal virus PpV01 has an icosahedral capsid with T=219 quasisymmetry.

7 January 2021

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10.1016/J.VIROL.2008.01.043

7 January 2021

Identifiers

DOI

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10 December 2017

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PubMed ID

18308362