Osmo-regulation of bacterial transcription via poised RNA polymerase (Q44852694)

6 December 2017

Osmo-regulation of bacterial transcription via poised RNA polymerase (English)

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6 December 2017

Shun Jin Lee

1

1 reference

PubMed ID

15099515

6 December 2017

Jay D Gralla

series ordinal

2

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6 December 2017

1 April 2004

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6 December 2017

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6 December 2017

14

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6 December 2017

2

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6 December 2017

153-162

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What makes an Escherichia coli promoter sigma(S) dependent? Role of the -13/-14 nucleotide promoter positions and region 2.5 of sigma(S).

6 December 2017

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Involvement of differential efficiency of transcription by esigmas and esigma70 RNA polymerase holoenzymes in growth phase regulation of the Escherichia coli osmE promoter

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

DNA supercoiling contributes to disconnect sigmaS accumulation from sigmaS-dependent transcription in Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

High-resolution analysis of lac transcription complexes inside cells.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Roles of cytoplasmic osmolytes, water, and crowding in the response of Escherichia coli to osmotic stress: biophysical basis of osmoprotection by glycine betaine

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Vapor pressure osmometry studies of osmolyte-protein interactions: implications for the action of osmoprotectants in vivo and for the interpretation of "osmotic stress" experiments in vitro

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Promoter selectivity control of Escherichia coli RNA polymerase by ionic strength: differential recognition of osmoregulated promoters by E sigma D and E sigma S holoenzymes

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Transient accumulation of potassium glutamate and its replacement by trehalose during adaptation of growing cells of Escherichia coli K-12 to elevated sodium chloride concentrations

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

DNAase I-hypersensitive sites of chromatin

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Context-dependent effects of upstream A-tracts. Stimulation or inhibition of Escherichia coli promoter function

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Roles for inhibitory interactions in the use of the -10 promoter element by sigma 70 holoenzyme

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Escherichia coli promoter opening and -10 recognition: mutational analysis of sigma70.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Promoter recognition and discrimination by EsigmaS RNA polymerase

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Trehalose is not relevant for in vivo activity of sigmaS-containing RNA polymerase in Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

UPs and downs in bacterial transcription initiation: the role of the alpha subunit of RNA polymerase in promoter recognition

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Identification of osmoresponsive genes in Escherichia coli: evidence for participation of potassium and proline transport systems in osmoregulation.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

proP-mediated proline transport also plays a role in Escherichia coli osmoregulation

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Back to log phase: sigma S as a global regulator in the osmotic control of gene expression in Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

A physiological role for DNA supercoiling in the osmotic regulation of gene expression in S. typhimurium and E. coli

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Mechanisms of plant desiccation tolerance.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Osmotic adaptation in yeast--control of the yeast osmolyte system

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Functional modulation of Escherichia coli RNA polymerase

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

DNA binding is not sufficient for H-NS-mediated repression of proU expression.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Molecular cloning and physical mapping of the otsBA genes, which encode the osmoregulatory trehalose pathway of Escherichia coli: evidence that transcription is activated by katF (AppR)

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Uptake and synthesis of compatible solutes as microbial stress responses to high-osmolality environments

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Stimulatory effect of trehalose on formation and activity of Escherichia coli RNA polymerase E sigma38 holoenzyme

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Promoter selectivity of Escherichia coli RNA polymerase E sigma 70 and E sigma 38 holoenzymes. Effect of DNA supercoiling.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

A role for interaction of the RNA polymerase flap domain with the sigma subunit in promoter recognition.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

The cAMP receptor protein CRP can function as an osmoregulator of transcription in Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

The diversity of volume regulatory mechanisms

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Complex transcriptional control of the sigma s-dependent stationary-phase-induced and osmotically regulated osmY (csi-5) gene suggests novel roles for Lrp, cyclic AMP (cAMP) receptor protein-cAMP complex, and integration host factor in the stationar

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Osmoregulation in Escherichia coli by accumulation of organic osmolytes: betaines, glutamic acid, and trehalose

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Sigma38 (rpoS) RNA polymerase promoter engagement via -10 region nucleotides

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Promoter use by sigma 38 (rpoS) RNA polymerase. Amino acid clusters for DNA binding and isomerization

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Open complex formation in vitro by sigma38 (rpoS) RNA polymerase: roles for region 2 amino acids.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Evidence for involvement of proteins HU and RpoS in transcription of the osmoresponsive proU operon in Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Localization of amino acids required for Fis to function as a class II transcriptional activator at the RpoS-dependent proP P2 promoter

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Effects of H-NS and potassium glutamate on sigmaS- and sigma70-directed transcription in vitro from osmotically regulated P1 and P2 promoters of proU in Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Proline metabolism and transport in maize seedlings at low water potential

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Responses of E. coli to osmotic stress: large changes in amounts of cytoplasmic solutes and water

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Biophysical compensation mechanisms buffering E. coli protein-nucleic acid interactions against changing environments.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Metabolic engineering of osmoprotectant accumulation in plants

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

A third recognition element in bacterial promoters: DNA binding by the alpha subunit of RNA polymerase

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Protein surface salt bridges and paths for DNA wrapping

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Bacterial osmoadaptation: the role of osmolytes in bacterial stress and virulence.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Spacer mutations in the lac ps promoter

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Profiling early osmostress-dependent gene expression in Escherichia coli using DNA macroarrays

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Sequences in the -35 region of Escherichia coli rpoS-dependent genes promote transcription by E sigma S.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

Activation of RpoS-dependent proP P2 transcription by the Fis protein in vitro.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

osmY, a new hyperosmotically inducible gene, encodes a periplasmic protein in Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2804%2900202-3

7 January 2021

10.1016/S1097-2765(04)00202-3

Identifiers

DOI

1 reference

6 December 2017

1 reference

PubMed ID

15099515