The +2 NTP binding drives open complex formation in T7 RNA polymerase (Q44085043)

29 November 2017

The +2 NTP binding drives open complex formation in T7 RNA polymerase (English)

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29 November 2017

Natalie M Stano

1

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29 November 2017

Mikhail K Levin

series ordinal

2

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29 November 2017

Smita S Patel

series ordinal

3

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29 November 2017

language of work or name

English

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publication date

31 July 2002

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Journal of Biological Chemistry

29 November 2017

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29 November 2017

277

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29 November 2017

40

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29 November 2017

37292-37300

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Transcription regulation by initiating NTP concentration: rRNA synthesis in bacteria.

29 November 2017

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M201600200

Kinetic mechanism of GTP binding and RNA synthesis during transcription initiation by bacteriophage T7 RNA polymerase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M201600200

Structure of T7 RNA polymerase complexed to the transcriptional inhibitor T7 lysozyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M201600200

Kinetic mechanism of transcription initiation by bacteriophage T7 RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M201600200

Regulation of rRNA transcription correlates with nucleoside triphosphate sensing

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M201600200

T7 promoter release mediated by DNA scrunching

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M201600200

Studies of contacts between T7 RNA polymerase and its promoter reveal features in common with multisubunit RNA polymerases

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M201600200

Visualization and quantitative analysis of complex formation between E. coli RNA polymerase and an rRNA promoter in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M201600200

Spectroscopic determination of open complex formation at promoters for Escherichia coli RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M201600200

The intercalating beta-hairpin of T7 RNA polymerase plays a role in promoter DNA melting and in stabilizing the melted DNA for efficient RNA synthesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M201600200

Cloning and expression of the gene for bacteriophage T7 RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M201600200

Transcription by T7 RNA polymerase is not zinc-dependent and is abolished on amidomethylation of cysteine-347.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M201600200

Monte Carlo method for determining complete confidence probability distributions of estimated model parameters

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M201600200

Insights into transcription: structure and function of single-subunit DNA-dependent RNA polymerases

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M201600200

Structural basis for initiation of transcription from an RNA polymerase-promoter complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M201600200

Structure of a transcribing T7 RNA polymerase initiation complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M201600200

Kinetic and thermodynamic basis of promoter strength: multiple steps of transcription initiation by T7 RNA polymerase are modulated by the promoter sequence

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M201600200

T7 RNA polymerase does not interact with the 5'-phosphate of the initiating nucleotide.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M201600200

Roles of Mg2+ in the mechanism of formation and dissociation of open complexes between Escherichia coli RNA polymerase and the lambda PR promoter: kinetic evidence for a second open complex requiring Mg2+

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M201600200

Roles for non-TATA core promoter sequences in transcription and factor binding

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M201600200

The T7 RNA polymerase intercalating hairpin is important for promoter opening during initiation but not for RNA displacement or transcription bubble stability during elongation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M201600200

Misincorporation by wild-type and mutant T7 RNA polymerases: identification of interactions that reduce misincorporation rates by stabilizing the catalytically incompetent open conformation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M201600200

Peculiar 2-aminopurine fluorescence monitors the dynamics of open complex formation by bacteriophage T7 RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M201600200

Thermodynamic and kinetic measurements of promoter binding by T7 RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M201600200

Equilibrium and stopped-flow kinetic studies of interaction between T7 RNA polymerase and its promoters measured by protein and 2-aminopurine fluorescence changes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M201600200

Role of open complex instability in kinetic promoter selection by bacteriophage T7 RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M201600200

Equilibrium and rate constants for the interconversion of two conformations of -chymotrypsin. The existence of a catalytically inactive conformation at neutral p H

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M201600200

Positioning of the start site in the initiation of transcription by bacteriophage T7 RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M201600200

Interrupting the template strand of the T7 promoter facilitates translocation of the DNA during initiation, reducing transcript slippage and the release of abortive products

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M201600200

21 January 2018

Identifiers

DOI

10.1074/JBC.M201600200

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29 November 2017

1 reference