DNA adducts from a tumorigenic metabolite of benzo[a]pyrene block human RNA polymerase II elongation in a sequence- and stereochemistry-dependent manner (Q44078383)

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English	DNA adducts from a tumorigenic metabolite of benzo[a]pyrene block human RNA polymerase II elongation in a sequence- and stereochemistry-dependent manner	scientific article

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scholarly article

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Europe PubMed Central

29 November 2017

DNA adducts from a tumorigenic metabolite of benzo[a]pyrene block human RNA polymerase II elongation in a sequence- and stereochemistry-dependent manner (English)

1 reference

Europe PubMed Central

29 November 2017

5

object named as

Suse Broyde

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Europe PubMed Central

29 November 2017

author name string

Rebecca A Perlow

1

1 reference

Europe PubMed Central

29 November 2017

Alexander Kolbanovskii

2

1 reference

Europe PubMed Central

29 November 2017

Brian E Hingerty

3

1 reference

Europe PubMed Central

29 November 2017

Nicholas E Geacintov

4

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Europe PubMed Central

29 November 2017

David A Scicchitano

6

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Europe PubMed Central

29 November 2017

language of work or name

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publication date

1 August 2002

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Europe PubMed Central

29 November 2017

Journal of Molecular Biology

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Europe PubMed Central

29 November 2017

321

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Europe PubMed Central

29 November 2017

1

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Europe PubMed Central

29 November 2017

29-47

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Europe PubMed Central

29 November 2017

NMR solution structures of stereoisometric covalent polycyclic aromatic carcinogen-DNA adduct: principles, patterns, and diversity

1 reference

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Factors that influence the mutagenic patterns of DNA adducts from chemical carcinogens

1 reference

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The major, N2-dG adduct of (+)-anti-B[a]PDE induces G-->A mutations in a 5'-AGA-3' sequence context.

1 reference

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Mutagenic potential of stereoisomeric bay region (+)- and (-)-cis-anti-benzo[a]pyrene diol epoxide-N2-2'-deoxyguanosine adducts in Escherichia coli and simian kidney cells

1 reference

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How stereochemistry affects mutagenesis by N2-deoxyguanosine adducts of 7,8-dihydroxy-9,10-epoxy-7,8,9,10-tetrahydrobenzo[a]pyrene: configuration of the adduct bond is more important than those of the hydroxyl groups

1 reference

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Sequence specific mutagenesis of the major (+)-anti-benzo[a]pyrene diol epoxide-DNA adduct at a mutational hot spot in vitro and in Escherichia coli cells.

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Fidelity of translesional synthesis past benzo[a]pyrene diol epoxide-2'-deoxyguanosine DNA adducts: marked effects of host cell, sequence context, and chirality

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The role of DNA adducts in chemical carcinogenesis

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Molecular mechanism of nucleotide excision repair.

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Repair of DNA lesions induced by polycyclic aromatic hydrocarbons in human cell-free extracts: involvement of two excision repair mechanisms in vitro.

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Repair of DNA lesions: mechanisms and relative repair efficiencies

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Stable binding of human XPC complex to irradiated DNA confers strong discrimination for damaged sites

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A multistep damage recognition mechanism for global genomic nucleotide excision repair

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Model for XPC-independent transcription-coupled repair of pyrimidine dimers in humans

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Effect of DNA lesions on transcription elongation

1 reference

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7 January 2021

Transcript cleavage by RNA polymerase II arrested by a cyclobutane pyrimidine dimer in the DNA template

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7 January 2021

Intragenomic repair heterogeneity of DNA damage

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Stranded in an active gene

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7 January 2021

Characterization of reaction intermediates of human excision repair nuclease.

1 reference

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7 January 2021

The residual repair capacity of xeroderma pigmentosum complementation group C fibroblasts is highly specific for transcriptionally active DNA

1 reference

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7 January 2021

Preferential repair of ionizing radiation-induced damage in the transcribed strand of an active human gene is defective in Cockayne syndrome

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7 January 2021

The Cockayne syndrome group A gene encodes a WD repeat protein that interacts with CSB protein and a subunit of RNA polymerase II TFIIH

1 reference

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7 January 2021

The 14th Datta Lecture. TFIIH: from transcription to clinic

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ERCC6, a member of a subfamily of putative helicases, is involved in Cockayne's syndrome and preferential repair of active genes

1 reference

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7 January 2021

Interactions involving the human RNA polymerase II transcription/nucleotide excision repair complex TFIIH, the nucleotide excision repair protein XPG, and Cockayne syndrome group B (CSB) protein

1 reference

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7 January 2021

Human transcription-repair coupling factor CSB/ERCC6 is a DNA-stimulated ATPase but is not a helicase and does not disrupt the ternary transcription complex of stalled RNA polymerase II

1 reference

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7 January 2021

Preferential repair and strand-specific repair of benzo[a]pyrene diol epoxide adducts in the HPRT gene of diploid human fibroblasts

1 reference

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Slow repair of bulky DNA adducts along the nontranscribed strand of the human p53 gene may explain the strand bias of transversion mutations in cancers.

1 reference

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7 January 2021

Metabolism of benzo[a]pyrene. VI. Stereoselective metabolism of benzo[a]pyrene and benzo[a]pyrene 7,8-dihydrodiol to diol epoxides

1 reference

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7 January 2021

Enzymatic conversion of benzo(a)pyrene leading predominantly to the diol-epoxide r-7,t-8-dihydroxy-t-9,10-oxy-7,8,9,10-tetrahydrobenzo(a)pyrene through a single enantiomer of r-7, t-8-dihydroxy-7,8-dihydrobenzo(a)pyrene

1 reference

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7 January 2021

Microsomal mixed-function oxidases and epoxide hydratase convert benzo(a)pyrene stereospecifically to optically active dihydroxydihydrobenzo(a)pyrenes

1 reference

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7 January 2021

Tumorigenicity of the optical enantiomers of the diastereomeric benzo[a]pyrene 7,8-diol-9,10-epoxides in newborn mice: exceptional activity of (+)-7beta,8alpha-dihydroxy-9alpha,10alpha-epoxy-7,8,9,10-tetrahydrobenzo[a]pyrene

1 reference

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7 January 2021

Double-stranded DNA stereoselectively binds benzo(a)pyrene diol epoxides

1 reference

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7 January 2021

Solution conformation of the major adduct between the carcinogen (+)-anti-benzo[a]pyrene diol epoxide and DNA

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Influence of benzo[a]pyrene diol epoxide chirality on solution conformations of DNA covalent adducts: the (-)-trans-anti-[BP]G.C adduct structure and comparison with the (+)-trans-anti-[BP]G.C enantiomer

1 reference

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Site-specific benzo[a]pyrene diol epoxide-DNA adducts inhibit transcription elongation by bacteriophage T7 RNA polymerase

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Prediction of DNA structure from sequence: a build-up technique

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Stereochemical origin of opposite orientations in DNA adducts derived from enantiomeric anti-benzo[a]pyrene diol epoxides with different tumorigenic potentials.

1 reference

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Structure of a transcribing T7 RNA polymerase initiation complex

1 reference

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Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution

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The cytomegalovirus enhancer: a pan-active control element in transgenic mice

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Nucleotide sequence context effect of a cyclobutane pyrimidine dimer upon RNA polymerase II transcription

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Effects of abasic sites and DNA single-strand breaks on prokaryotic RNA polymerases

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Effect of thymine glycol on transcription elongation by T7 RNA polymerase and mammalian RNA polymerase II

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Inhibition of RNA Polymerase II Transcription in Human Cell Extracts by Cisplatin DNA Damage

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Structural characterization of RNA polymerase II complexes arrested by a cyclobutane pyrimidine dimer in the transcribed strand of template DNA.

1 reference

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7 January 2021

Incorrect base insertion and prematurely terminated transcripts during T7 RNA polymerase transcription elongation past benzo[a]pyrenediol epoxide-modified DNA

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7 January 2021

The RNA-DNA hybrid maintains the register of transcription by preventing backtracking of RNA polymerase.

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Association of human protein-tyrosine phosphatase kappa with members of the armadillo family

1 reference

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Evading the proofreading machinery of a replicative DNA polymerase: induction of a mutation by an environmental carcinogen

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7 January 2021

Solution conformation of the (-)-cis-anti-benzo[a]pyrenyl-dG adduct opposite dC in a DNA duplex: intercalation of the covalently attached BP ring into the helix with base displacement of the modified deoxyguanosine into the major groove

1 reference

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7 January 2021

Solution conformation of the (+)-cis-anti-[BP]dG adduct in a DNA duplex: intercalation of the covalently attached benzo[a]pyrenyl ring into the helix and displacement of the modified deoxyguanosine.

1 reference

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7 January 2021

Insights into transcription: structure and function of single-subunit DNA-dependent RNA polymerases

1 reference

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Structural basis of transcription: RNA polymerase II at 2.8 angstrom resolution

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Base sequence dependence of in vitro translesional DNA replication past a bulky lesion catalyzed by the exo- Klenow fragment of Pol I.

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7 January 2021

DNA polymerase action on benzo[a]pyrene-DNA adducts

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Sequence context profoundly influences the mutagenic potency of trans-opened benzo[a]pyrene 7,8-diol 9,10-epoxide-purine nucleoside adducts in site-specific mutation studies

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Differences between the mutational consequences of replication of cis- and trans-opened benzo[a]pyrene 7,8-diol 9,10-epoxide-deoxyguanosine adducts in M13mp7L2 constructs

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Effects of bulky polycyclic aromatic hydrocarbon adducts on DNA replication by exonuclease-deficient T7 and T4 DNA polymerases.

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Translesion synthesis by human DNA polymerase kappa on a DNA template containing a single stereoisomer of dG-(+)- or dG-(-)-anti-N(2)-BPDE (7,8-dihydroxy-anti-9,10-epoxy-7,8,9,10-tetrahydrobenzo[a]pyrene).

1 reference

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7 January 2021

Translesional synthesis on a DNA template containing a single stereoisomer of dG-(+)- or dG-(-)-anti-BPDE (7,8-dihydroxy-anti-9,10-epoxy-7,8,9,10-tetrahydrobenzo[a]pyrene)

1 reference

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7 January 2021

Synthesis and characterization of covalent adducts derived from the binding of benzo[a]pyrene diol expoxide to a -GGG- sequence in a deoxyoligonucleotide

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The Protein Data Bank

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Effects of aminofluorene and acetylaminofluorene DNA adducts on transcriptional elongation by RNA polymerase II

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10.1016/S0022-2836(02)00593-4

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Europe PubMed Central

29 November 2017

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Europe PubMed Central

29 November 2017

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