Constitutive mutations of the OccR regulatory protein affect DNA bending in response to metabolites released from plant tumors (Q43805310)

27 November 2017

Constitutive mutations of the OccR regulatory protein affect DNA bending in response to metabolites released from plant tumors (English)

1 reference

27 November 2017

Reiko Akakura

1

1 reference

PubMed ID

11717314

27 November 2017

Stephen C Winans

series ordinal

2

1 reference

PubMed ID

11717314

27 November 2017

language of work or name

English

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publication date

20 November 2001

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Journal of Biological Chemistry

27 November 2017

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27 November 2017

277

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27 November 2017

8

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27 November 2017

5866-5874

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A large family of bacterial activator proteins

27 November 2017

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

The repertoire of DNA-binding transcriptional regulators in Escherichia coli K-12.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Molecular biology of the LysR family of transcriptional regulators

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Structural basis of the redox switch in the OxyR transcription factor

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

The structure of the cofactor-binding fragment of the LysR family member, CysB: a familiar fold with a surprising subunit arrangement

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Atomic structure and specificity of bacterial periplasmic receptors for active transport and chemotaxis: variation of common themes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Residue threonine-149 of the Salmonella typhimurium CysB transcription activator: mutations causing constitutive expression of positively regulated genes of the cysteine regulon.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Mutational analysis of the redox-sensitive transcriptional regulator OxyR: regions important for oxidation and transcriptional activation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

In vitro characterization of constitutive CysB proteins from Salmonella typhimurium.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Functional dissection of the LysR-type CysB transcriptional regulator. Regions important for DNA binding, inducer response, oligomerization, and positive control

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Mutational analysis of the redox-sensitive transcriptional regulator OxyR: regions important for DNA binding and multimerization

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Activation of the catBCA promoter: probing the interaction of CatR and RNA polymerase through in vitro transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Activation defects caused by mutations in Escherichia coli rpoA are promoter specific

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Mapping of the OxyR protein contact site in the C-terminal region of RNA polymerase alpha subunit

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Characterization of the MetR binding sites for the glyA gene of Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Roles of CatR and cis,cis-muconate in activation of the catBC operon, which is involved in benzoate degradation in Pseudomonas putida

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Redox-dependent shift of OxyR-DNA contacts along an extended DNA-binding site: a mechanism for differential promoter selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

The A. tumefaciens transcriptional activator OccR causes a bend at a target promoter, which is partially relaxed by a plant tumor metabolite

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Hydroxyl radical footprints and half-site arrangements of binding sites for the CysB transcriptional activator of Salmonella typhimurium

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

DNA bending by the TrpI protein of Pseudomonas aeruginosa.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Clues and consequences of DNA bending in transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Synthetic DNA bending sequences increase the rate of in vitro transcription initiation at the Escherichia coli lac promoter

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Characterization of a putative periplasmic transport system for octopine accumulation encoded by Agrobacterium tumefaciens Ti plasmid pTiA6.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Localization of OccR-activated and TraR-activated promoters that express two ABC-type permeases and the traR gene of Ti plasmid pTiR10.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Altered-function mutations in the Agrobacterium tumefaciens OccR protein and in an OccR-regulated promoter.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Use of T7 RNA polymerase to direct expression of cloned genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Controlled expression of the transcriptional activator gene virG in Agrobacterium tumefaciens by using the Escherichia coli lac promoter

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Identification of Agrobacterium tumefaciens genes that direct the complete catabolism of octopine

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Absence of substantial bending in Xenopus laevis transcription factor IIIA-DNA complexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Improved binary vectors for Agrobacterium-mediated plant transformation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Effector Specificity Mutants of the Transcriptional Activator NahR of Naphthalene DegradingPseudomonasDefine Protein Sites Involved in Binding of Aromatic Inducers

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Purification and mutant analysis of Citrobacter freundii AmpR, the regulator for chromosomal AmpC beta-lactamase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Demonstration, characterization, and mutational analysis of NahR protein binding to nah and sal promoters.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Interactions of NodD at the nod Box: NodD binds to two distinct sites on the same face of the helix and induces a bend in the DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Differential DNA bending introduced by the Pseudomonas putida LysR‐type regulator, CatR, at the plasmid‐borne pheBA and chromosomal catBC promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Protein-induced bending as a transcriptional switch

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

The sixty nucleotide OccR operator contains a subsite essential and sufficient for OccR binding and a second subsite required for ligand-responsive DNA bending

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

Three-minute G + A specific reaction for DNA sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110555200

21 January 2018

Identifiers

DOI

10.1074/JBC.M110555200

1 reference

27 November 2017

1 reference

PubMed ID

11717314