MetDFBA: incorporating time-resolved metabolomics measurements into dynamic flux balance analysis (Q43704553)

26 November 2017

MetDFBA: incorporating time-resolved metabolomics measurements into dynamic flux balance analysis (English)

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Huub C J Hoefsloot

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author name string

A Marcel Willemsen

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26 November 2017

Huub C J Hoefsloot

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Margriet M W B Hendriks

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S Aljoscha Wahl

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Age K Smilde

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Antoine H C van Kampen

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15 October 2014

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137-145

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26 November 2017

Biological robustness

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It is all about metabolic fluxes

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What is flux balance analysis?

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Dynamic flux balance analysis of diauxic growth in Escherichia coli

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Characterization of the metabolic shift between oxidative and fermentative growth in Saccharomyces cerevisiae by comparative 13C flux analysis

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In vivo dynamics of the pentose phosphate pathway in Saccharomyces cerevisiae.

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Multidimensional optimality of microbial metabolism

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Shifts in growth strategies reflect tradeoffs in cellular economics

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Integrated energy and flux balance based multiobjective framework for large-scale metabolic networks.

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PAGE: parametric analysis of gene set enrichment

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13CFLUX2--high-performance software suite for (13)C-metabolic flux analysis.

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Computational tools for isotopically instationary 13C labeling experiments under metabolic steady state conditions.

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Genome-level transcription data of Yersinia pestis analyzed with a new metabolic constraint-based approach

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Flux imbalance analysis and the sensitivity of cellular growth to changes in metabolite pools

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Integration of expression data in genome-scale metabolic network reconstructions

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Energy balance for analysis of complex metabolic networks

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k-OptForce: integrating kinetics with flux balance analysis for strain design

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Can yeast glycolysis be understood in terms of in vitro kinetics of the constituent enzymes? Testing biochemistry

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21 January 2018

Identifiers

DOI

10.1039/C4MB00510D

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26 November 2017

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