In response to 'Can sugars be produced from fatty acids? A test case for pathway analysis tools'. (Q43272344)

18 November 2017

In response to 'Can sugars be produced from fatty acids? A test case for pathway analysis tools'. (English)

1 reference

18 November 2017

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3

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18 November 2017

Karoline Faust

1

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PubMed ID

19776213

18 November 2017

Didier Croes

series ordinal

2

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PubMed ID

19776213

18 November 2017

language of work or name

English

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publication date

23 September 2009

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18 November 2017

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18 November 2017

25

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18 November 2017

23

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18 November 2017

3202-3205

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In Silico Atomic Tracing by Substrate-Product Relationships in Escherichia coli Intermediary Metabolism

18 November 2017

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

MetaRoute: fast search for relevant metabolic routes for interactive network navigation and visualization

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

Kinetic studies and biochemical pathway analysis of anaerobic poly-(R)-3-hydroxybutyric acid synthesis in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

Metabolic PathFinding: inferring relevant pathways in biochemical networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

Inferring meaningful pathways in weighted metabolic networks.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

Predicting the biodegradation products of perfluorinated chemicals using CATABOL.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

Metabolic flux balance analysis and the in silico analysis of Escherichia coli K-12 gene deletions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

The University of Minnesota pathway prediction system: predicting metabolic logic

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

Identification of genome-scale metabolic network models using experimentally measured flux profiles

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

Towards the engineering of in vitro systems

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

KEGG for linking genomes to life and the environment

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

The Pathway Tools software

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

Filling gaps in a metabolic network using expression information.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

Identifying metabolic enzymes with multiple types of association evidence

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

Pathway analysis, engineering, and physiological considerations for redirecting central metabolism.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

Towards preparative asymmetric synthesis of beta-hydroxy-alpha-amino acids: L-allo-threonine formation from glycine and acetaldehyde using recombinant GlyA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

PathMiner: predicting metabolic pathways by heuristic search

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

KAAS: an automatic genome annotation and pathway reconstruction server

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

Critical assessment of methods of protein structure prediction-Round VII

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

MetaRouter: bioinformatics for bioremediation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

METATOOL: for studying metabolic networks.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

A critical examination of stoichiometric and path-finding approaches to metabolic pathways.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

Elementary modes analysis of photosynthate metabolism in the chloroplast stroma.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

Aerobic fermentation of D-glucose by an evolved cytochrome oxidase-deficient Escherichia coli strain

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

Metabolic pathway analysis web service (Pathway Hunter Tool at CUBIC).

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

Quantitative elementary mode analysis of metabolic pathways: the example of yeast glycolysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

Design, construction and performance of the most efficient biomass producing E. coli bacterium.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

Elementary mode analysis: a useful metabolic pathway analysis tool for characterizing cellular metabolism

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

MaGe: a microbial genome annotation system supported by synteny results

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

Stoichiometric model for evaluating the metabolic capabilities of the facultative methylotroph Methylobacterium extorquens AM1, with application to reconstruction of C(3) and C(4) metabolism

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

Metatool 5.0: fast and flexible elementary modes analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

Biosynthesis of camptothecin. In silico and in vivo tracer study from [1-13C]glucose

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

Can sugars be produced from fatty acids? A test case for pathway analysis tools

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

Can yeast glycolysis be understood in terms of in vitro kinetics of the constituent enzymes? Testing biochemistry

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

Metabolic Pathfinding Using RPAIR Annotation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP557

10.1093/BIOINFORMATICS/BTP557

21 January 2018

Identifiers

DOI

1 reference

journals/bioinformatics/FaustCH09

18 November 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

PubMed ID

19776213