The allosteric transition in DnaK probed by infrared difference spectroscopy. Concerted ATP-induced rearrangement of the substrate binding domain (Q43043551)

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scientific article published on 29 December 2005

Language	Label	Description	Also known as
English	The allosteric transition in DnaK probed by infrared difference spectroscopy. Concerted ATP-induced rearrangement of the substrate binding domain	scientific article published on 29 December 2005

Statements

scholarly article

1 reference

Europe PubMed Central

12 November 2017

The allosteric transition in DnaK probed by infrared difference spectroscopy. Concerted ATP-induced rearrangement of the substrate binding domain (English)

1 reference

Europe PubMed Central

12 November 2017

3

1 reference

Europe PubMed Central

12 November 2017

author name string

Fernando Moro

1

1 reference

Europe PubMed Central

12 November 2017

Vanesa Fernández-Sáiz

2

1 reference

Europe PubMed Central

12 November 2017

publication date

29 December 2005

1 reference

Europe PubMed Central

12 November 2017

Protein Science

1 reference

Europe PubMed Central

12 November 2017

15

1 reference

Europe PubMed Central

12 November 2017

2

1 reference

Europe PubMed Central

12 November 2017

223-233

1 reference

Europe PubMed Central

12 November 2017

NMR investigations of allosteric processes in a two-domain Thermus thermophilus Hsp70 molecular chaperone

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242457

26 May 2018

The solution structure of the bacterial HSP70 chaperone protein domain DnaK(393–507) in complex with the peptide NRLLLTG

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242457

26 May 2018

What vibrations tell us about proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242457

26 May 2018

The unfolding story of the Escherichia coli Hsp70 DnaK: is DnaK a holdase or an unfoldase?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242457

26 May 2018

ATPase-defective derivatives of Escherichia coli DnaK that behave differently with respect to ATP-induced conformational change and peptide release

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242457

26 May 2018

Characterization of a lidless form of the molecular chaperone DnaK: deletion of the lid increases peptide on- and off-rate constants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242457

26 May 2018

The infrared absorption of amino acid side chains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242457

26 May 2018

Reversible thermal transition in GrpE, the nucleotide exchange factor of the DnaK heat-shock system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242457

26 May 2018

Molecular basis for interactions of the DnaK chaperone with substrates.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242457

26 May 2018

Structural insights into substrate binding by the molecular chaperone DnaK

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242457

26 May 2018

Structural changes of the sarcoplasmic reticulum Ca(2+)-ATPase upon nucleotide binding studied by fourier transform infrared spectroscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242457

26 May 2018

Mutations in the substrate binding domain of the Escherichia coli 70 kDa molecular chaperone, DnaK, which alter substrate affinity or interdomain coupling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242457

26 May 2018

NMR solution structure of the 21 kDa chaperone protein DnaK substrate binding domain: a preview of chaperone-protein interaction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242457

26 May 2018

The Hsp70 and Hsp60 chaperone machines

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242457

26 May 2018

Crystal structure of the nucleotide exchange factor GrpE bound to the ATPase domain of the molecular chaperone DnaK

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242457

26 May 2018

Structural analysis of substrate binding by the molecular chaperone DnaK

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242457

26 May 2018

Molecular chaperones in cellular protein folding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242457

26 May 2018

Conformational characterization of DnaK and its complexes by small-angle X-ray scattering

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242457

26 May 2018

Quantitative studies of the structure of proteins in solution by Fourier-transform infrared spectroscopy.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242457

26 May 2018

Reaction-induced infrared difference spectroscopy for the study of protein function and reaction mechanisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242457

26 May 2018

The use and misuse of FTIR spectroscopy in the determination of protein structure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242457

26 May 2018

Kinetics of nucleotide-induced changes in the tryptophan fluorescence of the molecular chaperone Hsc70 and its subfragments suggest the ATP-induced conformational change follows initial ATP binding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242457

26 May 2018

Infrared spectroscopic signals arising from ligand binding and conformational changes in the catalytic cycle of sarcoplasmic reticulum calcium ATPase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242457

26 May 2018

NMR study of nucleotide-induced changes in the nucleotide binding domain of Thermus thermophilus Hsp70 chaperone DnaK: implications for the allosteric mechanism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242457

16 August 2018

The lid subdomain of DnaK is required for the stabilization of the substrate-binding site.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242457

16 August 2018

Detection of a concerted conformational change in the ATPase domain of DnaK triggered by peptide binding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242457

16 August 2018

Interdomain interaction through helices A and B of DnaK peptide binding domain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242457

16 August 2018

The second step of ATP binding to DnaK induces peptide release.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242457

16 August 2018

Modulation of the ATPase activity of the molecular chaperone DnaK by peptides and the DnaJ and GrpE heat shock proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242457

16 August 2018

Solution small-angle X-ray scattering study of the molecular chaperone Hsc70 and its subfragments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242457

16 August 2018

Conformational Changes Generated in GroEL during ATP Hydrolysis as Seen by Time-resolved Infrared Spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/16384998

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Estimation of amino acid residue side-chain absorption in the infrared spectra of protein solutions in heavy water

1 reference

https://pubmed.ncbi.nlm.nih.gov/16384998

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Examination of the secondary structure of proteins by deconvolved FTIR spectra

1 reference

https://pubmed.ncbi.nlm.nih.gov/16384998

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Resolution-enhanced Fourier transform infrared spectroscopy of enzymes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16384998

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Quantitative IR spectrophotometry of peptide compounds in water (H2O) solutions. I. Spectral parameters of amino acid residue absorption bands

1 reference

https://pubmed.ncbi.nlm.nih.gov/16384998

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nucleotide-induced conformational changes in the ATPase and substrate binding domains of the DnaK chaperone provide evidence for interdomain communication

1 reference

https://pubmed.ncbi.nlm.nih.gov/16384998

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Time-resolved infrared spectroscopy of the Ca2+-ATPase. The enzyme at work

1 reference

https://pubmed.ncbi.nlm.nih.gov/16384998

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Kinetic characterization of the ATPase cycle of the DnaK molecular chaperone

1 reference

https://pubmed.ncbi.nlm.nih.gov/16384998

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Kinetics of the reactions of the Escherichia coli molecular chaperone DnaK with ATP: evidence that a three-step reaction precedes ATP hydrolysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/16384998

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Visualization of a slow, ATP-induced structural transition in the bacterial molecular chaperone DnaK

1 reference

https://pubmed.ncbi.nlm.nih.gov/16384998

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1110/PS.051732706

1 reference

Europe PubMed Central

12 November 2017

1 reference

Europe PubMed Central

12 November 2017

1 reference

Europe PubMed Central

12 November 2017

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