RNA-seq transcriptional profiling of Herbaspirillum seropedicae colonizing wheat (Triticum aestivum) roots. (Q42772742)

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5 March 2020

title

RNA-seq transcriptional profiling of Herbaspirillum seropedicae colonizing wheat (Triticum aestivum) roots (English)

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Helisson Faoro

6

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5 March 2020

Leda S Chubatsu

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Lucélia Donatti

8

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Gabriel Wajnberg

9

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Fábio Passetti

10

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author name string

V C S Pankievicz

1

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P Bonato

3

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E Balsanelli

4

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M Z Tadra-Sfeir

5

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R A Monteiro

11

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F O Pedrosa

12

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E M Souza

13

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publication date

22 January 2016

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number of pages

15

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inferred from page(s)

published in

Plant Molecular Biology

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volume

90

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page(s)

589-603

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issue

6

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https://scigraph.springernature.com/pub.10.1007/s11103-016-0430-6

5 March 2020

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cites work

Comparative proteomics analysis of the rice roots colonized by Herbaspirillum seropedicae strain SmR1 reveals induction of the methionine recycling in the plant host

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

The role of root exudates in rhizosphere interactions with plants and other organisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Maize root lectins mediate the interaction with Herbaspirillum seropedicae via N-acetyl glucosamine residues of lipopolysaccharides

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Exopolysaccharide biosynthesis enables mature biofilm formation on abiotic surfaces by Herbaspirillum seropedicae

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

The Herbaspirillum seropedicae SmR1 Fnr orthologs controls the cytochrome composition of the electron transport chain

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

GOing Bayesian: model-based gene set analysis of genome-scale data

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Plant science. Future prospects for cereals that fix nitrogen.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Dual RNA-seq transcriptional analysis of wheat roots colonized by Azospirillum brasilense reveals up-regulation of nutrient acquisition and cell cycle genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Proteomic analysis of Herbaspirillum seropedicae cultivated in the presence of sugar cane extract

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Structure of a bacterial multidrug ABC transporter

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Endophytic colonization and in planta nitrogen fixation by a Herbaspirillum sp. isolated from wild rice species

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Significance of Herbaspirillum seropedicae inoculation and/or straw amendment on growth and dinitrogen fixation of wheat using 15N-dilution method

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Key physiological properties contributing to rhizosphere adaptation and plant growth promotion abilities of Azospirillum brasilense

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Use of plant colonizing bacteria as chassis for transfer of N₂-fixation to cereals

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

A filamentous hemagglutinin-like protein of Xanthomonas axonopodis pv. citri, the phytopathogen responsible for citrus canker, is involved in bacterial virulence

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Bacterial chemotaxis: the five sensors of a bacterium

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Systems biology for enhanced plant nitrogen nutrition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Transcriptome analysis of Pseudomonas putida in response to nitrogen availability

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

The ATP switch model for ABC transporters

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Proteomic analysis of Herbaspirillum seropedicae reveals ammonium-induced AmtB-dependent membrane sequestration of PII proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Polyhydroxyalkanoate granules are complex subcellular organelles (carbonosomes).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Ecological and agricultural significance of bacterial polyhydroxyalkanoates

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Identification and characterization of PhbF: a DNA binding protein with regulatory role in the PHB metabolism of Herbaspirillum seropedicae SmR1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Data, information, knowledge and principle: back to metabolism in KEGG

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Exploring the function of alcohol dehydrogenases during the endophytic life of Azoarcus Sp. strain BH72.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Improvements in epoxy resin embedding methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

16S ribosomal DNA characterization of nitrogen-fixing bacteria isolated from banana (Musa spp.) and pineapple (Ananas comosus (L.) Merril).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Type IV pili and twitching motility

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Osmoadaptation by rhizosphere bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Comparative genome analysis of Burkholderia phytofirmans PsJN reveals a wide spectrum of endophytic lifestyles based on interaction strategies with host plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Mapping and quantifying mammalian transcriptomes by RNA-Seq

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Role of PII proteins in nitrogen fixation control of Herbaspirillum seropedicae strain SmR1

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Robust biological nitrogen fixation in a model grass-bacterial association.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Bioconductor: an open source framework for bioinformatics and computational biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

The use of lead citrate at high pH as an electron-opaque stain in electron microscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Biological nitrogen fixation in non-legume plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Evidence for the endophytic colonization of Phaseolus vulgaris (common bean) roots by the diazotroph Herbaspirillum seropedicae.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Expression of the nifA gene of Herbaspirillum seropedicae: role of the NtrC and NifA binding sites and of the -24/-12 promoter element

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Indole-3-acetic acid in microbial and microorganism-plant signaling

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Naringenin regulates expression of genes involved in cell wall synthesis in Herbaspirillum seropedicae.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Identification of proteins associated with polyhydroxybutyrate granules from Herbaspirillum seropedicae SmR1--old partners, new players

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11103-016-0430-6

Herbaspirillum seropedicae rfbB and rfbC genes are required for maize colonization

21 January 2018

1 reference

12 December 2020

Metabolic engineering of poly(3-hydroxyalkanoates): from DNA to plastic

1 reference

12 December 2020

Endophytic Herbaspirillum seropedicae expresses nif genes in gramineous plants

1 reference

12 December 2020

Living inside plants: bacterial endophytes

1 reference

12 December 2020

Molecular adaptations of Herbaspirillum seropedicae during colonization of the maize rhizosphere.

1 reference

12 December 2020

Control of Herbaspirillum seropedicae NifA activity by ammonium ions and oxygen.

1 reference

12 December 2020

Occurrence, metabolism, metabolic role, and industrial uses of bacterial polyhydroxyalkanoates

1 reference

12 December 2020

Staining of tissue sections for electron microscopy with heavy metals.

1 reference

12 December 2020

Nitrate assimilation by bacteria.

1 reference

12 December 2020

N-fertilizer saving by the inoculation of Gluconacetobacter diazotrophicus and Herbaspirillum sp. in micropropagated sugarcane plants

1 reference

12 December 2020

Genome of Herbaspirillum seropedicae strain SmR1, a specialized diazotrophic endophyte of tropical grasses

1 reference

12 December 2020

Polyamines and plant stress: activation of putrescine biosynthesis by osmotic shock

1 reference

12 December 2020

Infection and Colonization of Rice Seedlings by the Plant Growth-Promoting BacteriumHerbaspirillum seropedicaeZ67

1 reference

12 December 2020

Genome wide transcriptional profiling of Herbaspirillum seropedicae SmR1 grown in the presence of naringenin

1 reference

12 December 2020