Coupling of global and local vibrational modes in dynamic allostery of proteins (Q42716623)

5 November 2017

Coupling of global and local vibrational modes in dynamic allostery of proteins (English)

1 reference

Thomas Charles Buckland McLeish

5 November 2017

series ordinal

2

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5 November 2017

Rhoda J Hawkins

1

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language of work or name

English

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publication date

23 June 2006

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5 November 2017

8

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inferred from page(s)

published in

Biophysical Journal

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5 November 2017

91

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5 November 2017

6

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5 November 2017

2055-2062

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Dynamic allostery of protein alpha helical coiled-coils

5 November 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557547

New tools provide new insights in NMR studies of protein dynamics

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557547

Coupled protein domain motion in Taq polymerase revealed by neutron spin-echo spectroscopy

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557547

Quantifying allosteric effects in proteins.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557547

Simultaneous determination of protein structure and dynamics.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557547

Is allostery an intrinsic property of all dynamic proteins?

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557547

CBFbeta allosterically regulates the Runx1 Runt domain via a dynamic conformational equilibrium

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557547

ElNemo: a normal mode web server for protein movement analysis and the generation of templates for molecular replacement

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557547

The role of dynamics in allosteric regulation

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557547

Allosteric changes in protein structure computed by a simple mechanical model: hemoglobin T<-->R2 transition.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557547

Structural and functional studies of an intermediate on the pathway to operator binding by Escherichia coli MetJ.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557547

Intrinsic disorder and protein function

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557547

Dynamic activation of protein function: a view emerging from NMR spectroscopy.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557547

Conformational change of proteins arising from normal mode calculations

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557547

Tryptophan fluorescence reveals the conformational state of a dynamic loop in recombinant porcine fructose-1,6-bisphosphatase

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557547

Site-site communication in the EF-hand Ca2+-binding protein calbindin D9k

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557547

The allosteric mechanism of the chaperonin GroEL: a dynamic analysis

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557547

Direct evaluation of thermal fluctuations in proteins using a single-parameter harmonic potential

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557547

Protein dynamics and conformational transitions in allosteric proteins

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557547

Structure and function of Escherichia coli met repressor: similarities and contrasts with trp repressor

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557547

Electrostatic activation of Escherichia coli methionine repressor

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557547

Three-dimensional crystal structures of Escherichia coli met repressor with and without corepressor

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557547

Crystal structure of the met repressor-operator complex at 2.8 A resolution reveals DNA recognition by beta-strands

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557547

Coarse-grained model of entropic allostery.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557547

Configurational entropy and cooperativity between ligand binding and dimerization in glycopeptide antibiotics

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557547

Large Amplitude Elastic Motions in Proteins from a Single-Parameter, Atomic Analysis

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557547

Calorimetric studies of the energetics of protein-DNA interactions in the E. coli methionine repressor (MetJ) system

1 December 2018

1 reference

12 December 2020

Allostery without conformational change. A plausible model

1 reference

12 December 2020

Comment on “Entropy/enthalpy compensation: hydrophobic effect, micelles and protein complexes” by E. Fisicaro, C. Compari and A. Braibanti, Phys. Chem. Chem. Phys., 2004, 6, 4156

1 reference

12 December 2020

Two-state allosteric behavior in a single-domain signaling protein

1 reference

12 December 2020

Elastic Properties of Proteins: Insight on the Folding Process and Evolutionary Selection of Native Structures

1 reference

12 December 2020

10.1529/BIOPHYSJ.106.082180

Identifiers

DOI

1 reference

5 November 2017

1 reference

PMC publication ID

1557547

5 November 2017

PubMed publication ID

16798805

1 reference

PMC publication ID

1557547