Upstream curved sequences influence the initiation of transcription at the Escherichia coli galactose operon (Q42598987)

3 November 2017

title

Upstream curved sequences influence the initiation of transcription at the Escherichia coli galactose operon (English)

1 reference

3 November 2017

1 reference

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1313883

3 December 2023

regulatory sequence

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1313883

3 December 2023

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

3 December 2023

1

M. Lavigne

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1313883

3 December 2023

author name string

M. Herbert

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1313883

3 December 2023

A. Kolb

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1313883

3 December 2023

H. Buc

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1313883

3 December 2023

language of work or name

English

0 references

publication date

1 March 1992

1 reference

3 November 2017

20 March 1992

1 reference

National Center for Biotechnology Information

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=1313883

full work available at URL

3 December 2023

https://api.elsevier.com/content/article/PII:002228369290995V?httpAccept=text/xml

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

https://api.elsevier.com/content/article/PII:002228369290995V?httpAccept=text/plain

3 December 2023

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Journal of Molecular Biology

3 December 2023

published in

1 reference

3 November 2017

volume

224

1 reference

3 November 2017

issue

2

1 reference

3 November 2017

page(s)

293-306

1 reference

Mutations that reduce expression from the P2 promoter of the Escherichia coli galactose operon.

3 November 2017

cites work

2

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Conformational change in the DNA associated with an unusual promoter mutation in a tRNA operon of Salmonella.

3 December 2023

3

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Synthetic curved DNA sequences can act as transcriptional activators in Escherichia coli

3 December 2023

4

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Specific activation of transcription initiation by the sequence-specific DNA-binding agents distamycin A and netropsin.

3 December 2023

5

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Kinetics of open complex formation between Escherichia coli RNA polymerase and the lac UV5 promoter. Evidence for a sequential mechanism involving three steps

3 December 2023

6

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Procedure for the rapid, large-scale purification of Escherichia coli DNA-dependent RNA polymerase involving polymin P precipitation and DNA-cellulose chromatography

3 December 2023

8

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

The selection and characterisation of two novel mutations in the overlapping promoters of the Escherichia coli galactose operon.

3 December 2023

9

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

RNA polymerase makes important contacts upstream from base pair -49 at the Escherichia coli galactose operon P1 promoter.

3 December 2023

10

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Improved microfluorometric DNA determination in biological material using 33258 Hoechst

3 December 2023

11

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Recognition of nucleotide sequences at the Escherichia coli galactose operon P1 promoter by RNA polymerase

3 December 2023

12

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

The organization of open complexes between Escherichia coli RNA polymerase and DNA fragments carrying promoters either with or without consensus -35 region sequences

3 December 2023

13

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Influence of the sequence-dependent flexure of DNA on transcription in E. coli

3 December 2023

15

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Rigorous pattern-recognition methods for DNA sequences. Analysis of promoter sequences from Escherichia coli

3 December 2023

16

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

DNA sequence determinants of CAP-induced bending and protein binding affinity.

3 December 2023

17

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Synthetic DNA bending sequences increase the rate of in vitro transcription initiation at the Escherichia coli lac promoter

3 December 2023

18

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Stringent spacing requirements for transcription activation by CRP.

3 December 2023

19

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Scanning calorimetric study of the thermal unfolding of catabolite activator protein from Escherichia coli in the absence and presence of cyclic mononucleotides.

3 December 2023

20

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Regulation of open complex formation at the Escherichia coli galactose operon promoters. Simultaneous interaction of RNA polymerase, gal repressor and CAP/cAMP

3 December 2023

21

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

DNA determinants of rRNA synthesis in E. coli: growth rate dependent regulation, feedback inhibition, upstream activation, antitermination

3 December 2023

22

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Is there a single pathway for the folding of a polypeptide chain?

3 December 2023

23

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Compilation and analysis ofEscherichia colipromoter DNA sequences

3 December 2023

24

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Overlapping promoters and their control in Escherichia coli: the gal case

3 December 2023

25

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Upstream sequence activation of Escherichia coli argT promoter in vivo and in vitro.

3 December 2023

27

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

The upstream operator of the Escherichia coli galactose operon is sufficient for repression of transcription initiated at the cyclic AMP-stimulated promoter.

3 December 2023

32

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Requirement for an upstream element for optimal transcription of a bacterial tRNA gene

3 December 2023

33

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Purification and properties of the .sigma. subunit of Escherichia coli DNA-dependent RNA polymerase

3 December 2023

35

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Mechanism of CRP-cAMP activation of lac operon transcription initiation activation of the P1 promoter

3 December 2023

39

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Specific activation of open complex formation at an Escherichia coli promoter by oligo(N-methylpyrrolecarboxamide)s: effects of peptide length and identification of DNA target sites

3 December 2023

40

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Distamycin inhibition of topoisomerase I-DNA interaction: a mechanistic analysis

3 December 2023

41

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Alternate succession of steps can lead to the folding of a multidomain oligomeric protein

3 December 2023

42

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

The role of FIS in trans activation of stable RNA operons of E. coli

3 December 2023

43

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Enhancement of transcriptional activity of the Escherichia coli trp promoter by upstream A + T-rich regions.

3 December 2023

44

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Sequence distributions associated with DNA curvature are found upstream of strong E. coli promoters

3 December 2023

45

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Functional analysis of different sequence elements in the Escherichia coli galactose operon P2 promoter

3 December 2023

46

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Hydroxyl radical footprinting of the sequence-selective binding of netropsin and distamycin to DNA

3 December 2023

47

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Energetic coupling between DNA bending and base pair opening

3 December 2023

48

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Temperature dependence of the rate constants of the Escherichia coli RNA polymerase-lambda PR promoter interaction. Assignment of the kinetic steps corresponding to protein conformational change and DNA opening

3 December 2023

49

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Crystal structure of a CAP-DNA complex: the DNA is bent by 90 degrees

3 December 2023

51

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Interactions of the catabolite activator protein (CAP) at the galactose and lactose promoters of Escherichia coli probed by hydroxyl radical footprinting. The second CAP molecule which binds at gal and the one CAP at lac may act to stimulate transcr

3 December 2023

52

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

On the action of the cyclic AMP-cyclic AMP receptor protein complex at the Escherichia coli lactose and galactose promoter regions.

3 December 2023

54

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Correlation between the conformation of Escherichia coli -10 hexamer sequences and promoter strength: use of orthophenanthroline cuprous complex as a structural index

3 December 2023

55

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Escherichia coli promoter -10 and -35 region homologies correlate with binding and isomerization kinetics

3 December 2023

56

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Empirical estimation of protein-induced DNA bending angles: applications to lambda site-specific recombination complexes

3 December 2023

57

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

DNA conformation and protein binding

3 December 2023

58

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Helical phase dependent action of CRP: effect of the distance between the CRP site and the -35 region on promoter activity

3 December 2023

59

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Determination of netropsin-DNA binding constants from footprinting data

3 December 2023

60

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

The locus of sequence-directed and protein-induced DNA bending

3 December 2023

61

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

Nonintercalating DNA-binding ligands: specificity of the interaction and their use as tools in biophysical, biochemical and biological investigations of the genetic material

3 December 2023

62

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

DNA bend direction by phase sensitive detection

3 December 2023

63

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)90995-V

3 December 2023

Identifiers

1 reference

3 November 2017

1 reference